Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis FV-1
Orthologous TF(s) YpesF_010100004030
Regulated genes 2
Built upon 61 sites [see more]
Predicted regulatory interactions in Yersinia pestis FV-1
Locus tag Position Score Sequence
Position: -159
Score: 6
Sequence: CCATGTTACCGGTATCATGA
Locus tag: YpesF_010100004035
YpesF_010100004035 -159 6 CCATGTTACCGGTATCATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: High-affinity H+/gluconate symporter
Yersinia pestis KIM y3875 -159 6 CCATGTTACCGGTATCATGA
-145 5.1 TCATGATACCGGTAACAAAT
Serratia proteamaculans 568 Spro_4651 -185 5.3 GGTTGTTACCGGTATCATGA
-171 5.4 TCATGATACCGGTAACAATG
Position: -91
Score: 5.6
Sequence: ATTTGTTACCGGTATCATGA
Position: -77
Score: 5.5
Sequence: TCATGATACCGGTAACATGG
Locus tag: YpesF_010100004040
YpesF_010100004040 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Yersinia pestis KIM y3876 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
-77 5.1 TCATGATACCGGTAACGTGA
© 2009-2020 RegPrecise