Propagation of ArgR regulog to Yersinia pestis FV-1
| Source regulog: | ArgR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis FV-1 |
| Orthologous TF(s) | YpesF_010100021992 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -51
Score: 4.8 Sequence: AAAGAATAAAAATACAAA
Position: -30
Score: 4.8 Sequence: ACCGAATAAAAATTCAAA
Locus tag: YpesF_010100011374
|
||||
| YpesF_010100011374 | -51 | 4.8 | AAAGAATAAAAATACAAA | |
| -30 | 4.8 | ACCGAATAAAAATTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argA | ||||
| Ortholog function: N-alpha-acetylglutamate synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2818 | -49 | 4.6 | ACAGAATAAAAATACACT |
| -28 | 4.5 | TTCGAATAATCATGCAAA | ||
| Salmonella typhimurium LT2 | STM2992 | -52 | 4.6 | ACAGAATAAAAATACACT |
| -31 | 4.9 | TTCGAATAATAATTCACT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04183 | -140 | 4.6 | ACAGAATAAAAATACATT |
| -119 | 4.6 | TTCGAATAATCATGCAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03226 | -50 | 4.7 | ACAGAATAAAAATACAAT |
| -29 | 4.4 | TACGAATAATCATGCATT | ||
| Enterobacter sp. 638 | Ent638_3261 | -51 | 4.7 | ATCGAATAAAAATACACA |
| -30 | 4.5 | TACGAATAAACATTCACT | ||
| Erwinia amylovora ATCC 49946 | EAM_2726 | -50 | 4.7 | AAAGAATAAAAATACACT |
| -29 | 4.9 | ATCGAATAATAATGCATA | ||
| Yersinia pestis KIM | y3162 | -122 | 3.8 | TCAGTTTATTAATACATA |
| -103 | 4.2 | ACTTTATATATATGCAGT | ||
| -51 | 4.8 | AAAGAATAAAAATACAAA | ||
| -30 | 4.8 | ACCGAATAAAAATTCAAA | ||
| Serratia proteamaculans 568 | Spro_3812 | -51 | 4.8 | AAAGAATAAAAATACAAA |
| -30 | 4.8 | ATCGTATAAATATGCAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0999 | -50 | 4.5 | AAAGAATAAAAATACAGA |
| -29 | 4.8 | TACGAATAAAAATGCAAA | ||
| Edwardsiella tarda EIB202 | ETAE_0713 | 100 | 3.9 | GCAGAATAAAAATACAGA |
| 121 | 4.4 | AGCGAATAGATATTCACA | ||
| Proteus mirabilis HI4320 | PMI2307 | -52 | 4.7 | AAAGAATAAAAATACATT |
| -31 | 4.3 | TGCGAATAAAAATTCACC | ||
| 47 | 4.3 | TCCGTATATTAATGCACA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0644 | -51 | 4.1 | AAGGAATAAAAAAGCATA |
| -30 | 5 | TACGAATAAAAATTCAAT | ||
|
Position: -337
Score: 3.7 Sequence: AAATCAATATTATTCATA
Position: -207
Score: 3.7 Sequence: TAGTCATAATTATGCAGT
Locus tag: YpesF_010100015939
|
||||
| YpesF_010100015939 | -337 | 3.7 | AAATCAATATTATTCATA | |
| -207 | 3.7 | TAGTCATAATTATGCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: glutamate synthase, large subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3212 | -484 | 4.4 | ACTGCATAATCAATCAAA |
| -463 | 3.8 | ACCGAAATTTCATGCATA | ||
| Salmonella typhimurium LT2 | STM3330 | -574 | 4.5 | ATTGCATAATCAAGCAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04620 | -540 | 4.5 | ATTGCATAATCAAGCAAA |
| -519 | 3.9 | ACCGCAATTTCATTCACT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03624 | -536 | 3.8 | AATGAAATATATTTCAGC |
| Enterobacter sp. 638 | Ent638_3656 | -495 | 4.1 | TTTGAATAAAAACCCACT |
| -474 | 4.1 | ATTGCAATTTCATTCACC | ||
| Yersinia pestis KIM | y0128 | -590 | 3.7 | ATTCATCATAAATGCAAA |
| -580 | 3.8 | AATGCAAATAAAACCACT | ||
| Serratia proteamaculans 568 | Spro_4344 | -586 | 4.4 | ATTCATTATAAATGCAAA |
| -576 | 4.4 | AATGCAAATAAAATCACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0312 | -563 | 4.8 | AATGCATTTTTATTCGCT |
| Edwardsiella tarda EIB202 | ETAE_0527 | -584 | 4.3 | TCTGTATCAAAATTCACT |
| -563 | 4.8 | AGTGACTTTAAATTCATT | ||
| Proteus mirabilis HI4320 | PMI3677 | -275 | 4.5 | AATGAAATAATTTTCAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4009 | -562 | 4.5 | CATGAATAAATAATCAAA |
| -541 | 3.9 | ATTGACAAAATAAGCATA | ||
|
Position: -66
Score: 5 Sequence: GTTGAATAAAAATTCATT
Locus tag: YpesF_010100021992
|
||||
| YpesF_010100021992 | -66 | 5 | GTTGAATAAAAATTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argR | ||||
| Ortholog function: arginine repressor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3237 | -62 | 4.9 | TTTGCATAAAAATTCATC |
| Salmonella typhimurium LT2 | STM3360 | -64 | 4.9 | TTTGCATAAAAATTCATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04642 | -64 | 4.9 | TTTGCATAAAAATTCATC |
| -44 | 4 | TATGCATAATAATGTTGT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03645 | -64 | 4.8 | TTTGCATAAAAATTCATG |
| Enterobacter sp. 638 | Ent638_3672 | -63 | 5.3 | TTTGCATAAAAATTCATT |
| -53 | 4.1 | AATTCATTTACATGCATA | ||
| Erwinia amylovora ATCC 49946 | EAM_3122 | -83 | 5.3 | TTTGCATAAAAATTCATT |
| -63 | 4.7 | ATTGCATAATAATGTAAA | ||
| Yersinia pestis KIM | y0667 | -66 | 5 | GTTGAATAAAAATTCATT |
| -56 | 4.5 | AATTCATTTATATGCATA | ||
| Serratia proteamaculans 568 | Spro_0468 | -64 | 5.4 | ATTGCATAAAAATTCATT |
| -54 | 4.5 | AATTCATTTATATGCATA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0684 | -65 | 5.3 | ATTGCATAAAAATTCACA |
| Edwardsiella tarda EIB202 | ETAE_0384 | -61 | 4.9 | ATTGCATAAAAATTCACG |
| Proteus mirabilis HI4320 | PMI3399 | -64 | 4.9 | GTTGCATAAAAATTCACT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4548 | -84 | 3.9 | ATTGGCTATAAAATCATT |
| -63 | 5.4 | ATTGCATAAAAATTCATT | ||
|
Position: -84
Score: 4.3 Sequence: GATGATTTTTTATGCATA
Locus tag: YpesF_010100023382
|
||||
| YpesF_010100023382 | -84 | 4.3 | GATGATTTTTTATGCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argD | ||||
| Ortholog function: acetylornithine/succinyldiaminopimelate aminotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3359 | -69 | 4.8 | AGTGATTTTTTATGCATA |
| Salmonella typhimurium LT2 | STM3468 | -69 | 4.8 | AGTGATTTTTTATTCATA |
| -48 | 4.4 | TGTGATTATAATTTCACT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04780 | -57 | 4.8 | AGTGATTTTTTATGCATA |
| -36 | 3.9 | TATGACTGAAATTTCATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03745 | -74 | 4.7 | ACTGATTTTTTATGCATA |
| Enterobacter sp. 638 | Ent638_3786 | -55 | 4.7 | TGTGATTTTTTATGCATA |
| -34 | 4.4 | TGTGATTATATTTTCACT | ||
| Erwinia amylovora ATCC 49946 | EAM_3227 | -70 | 4.7 | TTTGACTTTTTATGCATA |
| -49 | 4.2 | TATGACTATATTTTCATA | ||
| Yersinia pestis KIM | y3954 | -72 | 4.3 | GATGATTTTTTATGCATA |
| Serratia proteamaculans 568 | Spro_4582 | -84 | 4.3 | ATTGGTTTTTTATGCATA |
| -63 | 4.4 | TGTGATTATATTTTCACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4065 | -72 | 4.8 | AGTGATTTTTTATGCATA |
| -62 | 4.6 | TATGCATATTTATTGACT | ||
| -51 | 4.5 | ATTGACTATATTTTCATT | ||
| Edwardsiella tarda EIB202 | ETAE_3247 | -73 | 4.9 | ATTGATTTATTATTCATA |
| -52 | 4.4 | TATGATTATAAAATCACT | ||
| Proteus mirabilis HI4320 | PMI2821 | -68 | 4.9 | TTTGATTTTTTATTCATA |
| -47 | 4.5 | AGTGATTATATTTTCATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0394 | -74 | 4.8 | TTTGATTTTTTATGCATA |