Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ArgR regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog: ArgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis FV-1
Orthologous TF(s) YpesF_010100021992
Regulated genes 5
Built upon 259 sites [see more]
Predicted regulatory interactions in Yersinia pestis FV-1
Locus tag Position Score Sequence
Position: -51
Score: 4.8
Sequence: AAAGAATAAAAATACAAA
Position: -30
Score: 4.8
Sequence: ACCGAATAAAAATTCAAA
Locus tag: YpesF_010100011374
YpesF_010100011374 -51 4.8 AAAGAATAAAAATACAAA
-30 4.8 ACCGAATAAAAATTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argA
Ortholog function: N-alpha-acetylglutamate synthase
Escherichia coli str. K-12 substr. MG1655 b2818 -49 4.6 ACAGAATAAAAATACACT
-28 4.5 TTCGAATAATCATGCAAA
Salmonella typhimurium LT2 STM2992 -52 4.6 ACAGAATAAAAATACACT
-31 4.9 TTCGAATAATAATTCACT
Citrobacter koseri ATCC BAA-895 CKO_04183 -140 4.6 ACAGAATAAAAATACATT
-119 4.6 TTCGAATAATCATGCAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03226 -50 4.7 ACAGAATAAAAATACAAT
-29 4.4 TACGAATAATCATGCATT
Enterobacter sp. 638 Ent638_3261 -51 4.7 ATCGAATAAAAATACACA
-30 4.5 TACGAATAAACATTCACT
Erwinia amylovora ATCC 49946 EAM_2726 -50 4.7 AAAGAATAAAAATACACT
-29 4.9 ATCGAATAATAATGCATA
Yersinia pestis KIM y3162 -122 3.8 TCAGTTTATTAATACATA
-103 4.2 ACTTTATATATATGCAGT
-51 4.8 AAAGAATAAAAATACAAA
-30 4.8 ACCGAATAAAAATTCAAA
Serratia proteamaculans 568 Spro_3812 -51 4.8 AAAGAATAAAAATACAAA
-30 4.8 ATCGTATAAATATGCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0999 -50 4.5 AAAGAATAAAAATACAGA
-29 4.8 TACGAATAAAAATGCAAA
Edwardsiella tarda EIB202 ETAE_0713 100 3.9 GCAGAATAAAAATACAGA
121 4.4 AGCGAATAGATATTCACA
Proteus mirabilis HI4320 PMI2307 -52 4.7 AAAGAATAAAAATACATT
-31 4.3 TGCGAATAAAAATTCACC
47 4.3 TCCGTATATTAATGCACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0644 -51 4.1 AAGGAATAAAAAAGCATA
-30 5 TACGAATAAAAATTCAAT
Position: -337
Score: 3.7
Sequence: AAATCAATATTATTCATA
Position: -207
Score: 3.7
Sequence: TAGTCATAATTATGCAGT
Locus tag: YpesF_010100015939
YpesF_010100015939 -337 3.7 AAATCAATATTATTCATA
-207 3.7 TAGTCATAATTATGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase, large subunit
Escherichia coli str. K-12 substr. MG1655 b3212 -484 4.4 ACTGCATAATCAATCAAA
-463 3.8 ACCGAAATTTCATGCATA
Salmonella typhimurium LT2 STM3330 -574 4.5 ATTGCATAATCAAGCAAA
Citrobacter koseri ATCC BAA-895 CKO_04620 -540 4.5 ATTGCATAATCAAGCAAA
-519 3.9 ACCGCAATTTCATTCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03624 -536 3.8 AATGAAATATATTTCAGC
Enterobacter sp. 638 Ent638_3656 -495 4.1 TTTGAATAAAAACCCACT
-474 4.1 ATTGCAATTTCATTCACC
Yersinia pestis KIM y0128 -590 3.7 ATTCATCATAAATGCAAA
-580 3.8 AATGCAAATAAAACCACT
Serratia proteamaculans 568 Spro_4344 -586 4.4 ATTCATTATAAATGCAAA
-576 4.4 AATGCAAATAAAATCACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0312 -563 4.8 AATGCATTTTTATTCGCT
Edwardsiella tarda EIB202 ETAE_0527 -584 4.3 TCTGTATCAAAATTCACT
-563 4.8 AGTGACTTTAAATTCATT
Proteus mirabilis HI4320 PMI3677 -275 4.5 AATGAAATAATTTTCAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4009 -562 4.5 CATGAATAAATAATCAAA
-541 3.9 ATTGACAAAATAAGCATA
Position: -66
Score: 5
Sequence: GTTGAATAAAAATTCATT
Locus tag: YpesF_010100021992
YpesF_010100021992 -66 5 GTTGAATAAAAATTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argR
Ortholog function: arginine repressor
Escherichia coli str. K-12 substr. MG1655 b3237 -62 4.9 TTTGCATAAAAATTCATC
Salmonella typhimurium LT2 STM3360 -64 4.9 TTTGCATAAAAATTCATC
Citrobacter koseri ATCC BAA-895 CKO_04642 -64 4.9 TTTGCATAAAAATTCATC
-44 4 TATGCATAATAATGTTGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03645 -64 4.8 TTTGCATAAAAATTCATG
Enterobacter sp. 638 Ent638_3672 -63 5.3 TTTGCATAAAAATTCATT
-53 4.1 AATTCATTTACATGCATA
Erwinia amylovora ATCC 49946 EAM_3122 -83 5.3 TTTGCATAAAAATTCATT
-63 4.7 ATTGCATAATAATGTAAA
Yersinia pestis KIM y0667 -66 5 GTTGAATAAAAATTCATT
-56 4.5 AATTCATTTATATGCATA
Serratia proteamaculans 568 Spro_0468 -64 5.4 ATTGCATAAAAATTCATT
-54 4.5 AATTCATTTATATGCATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0684 -65 5.3 ATTGCATAAAAATTCACA
Edwardsiella tarda EIB202 ETAE_0384 -61 4.9 ATTGCATAAAAATTCACG
Proteus mirabilis HI4320 PMI3399 -64 4.9 GTTGCATAAAAATTCACT
Photorhabdus luminescens subsp. laumondii TTO1 plu4548 -84 3.9 ATTGGCTATAAAATCATT
-63 5.4 ATTGCATAAAAATTCATT
Position: -84
Score: 4.3
Sequence: GATGATTTTTTATGCATA
Locus tag: YpesF_010100023382
YpesF_010100023382 -84 4.3 GATGATTTTTTATGCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argD
Ortholog function: acetylornithine/succinyldiaminopimelate aminotransferase
Escherichia coli str. K-12 substr. MG1655 b3359 -69 4.8 AGTGATTTTTTATGCATA
Salmonella typhimurium LT2 STM3468 -69 4.8 AGTGATTTTTTATTCATA
-48 4.4 TGTGATTATAATTTCACT
Citrobacter koseri ATCC BAA-895 CKO_04780 -57 4.8 AGTGATTTTTTATGCATA
-36 3.9 TATGACTGAAATTTCATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03745 -74 4.7 ACTGATTTTTTATGCATA
Enterobacter sp. 638 Ent638_3786 -55 4.7 TGTGATTTTTTATGCATA
-34 4.4 TGTGATTATATTTTCACT
Erwinia amylovora ATCC 49946 EAM_3227 -70 4.7 TTTGACTTTTTATGCATA
-49 4.2 TATGACTATATTTTCATA
Yersinia pestis KIM y3954 -72 4.3 GATGATTTTTTATGCATA
Serratia proteamaculans 568 Spro_4582 -84 4.3 ATTGGTTTTTTATGCATA
-63 4.4 TGTGATTATATTTTCACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4065 -72 4.8 AGTGATTTTTTATGCATA
-62 4.6 TATGCATATTTATTGACT
-51 4.5 ATTGACTATATTTTCATT
Edwardsiella tarda EIB202 ETAE_3247 -73 4.9 ATTGATTTATTATTCATA
-52 4.4 TATGATTATAAAATCACT
Proteus mirabilis HI4320 PMI2821 -68 4.9 TTTGATTTTTTATTCATA
-47 4.5 AGTGATTATATTTTCATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0394 -74 4.8 TTTGATTTTTTATGCATA
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