Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraC regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Yersinia pestis FV-1
Orthologous TF(s) YpesF_010100011884
Regulated genes 1
Built upon 56 sites [see more]
Predicted regulatory interactions in Yersinia pestis FV-1
Locus tag Position Score Sequence
Position: -189
Score: 7.8
Sequence: CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
Position: -114
Score: 7.5
Sequence: AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
Locus tag: YpesF_010100011864
YpesF_010100011864 -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
-114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Erwinia amylovora ATCC 49946 EAM_1697 -174 8.3 CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT
-99 6.3 CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2274 -176 7.1 TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT
-101 6.4 CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
Serratia proteamaculans 568 Spro_2244 -175 7.5 CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG
-100 7.1 AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Yersinia pestis KIM y2095 -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
-114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
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