Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PhnF regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog: PhnF - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis FV-1
Orthologous TF(s) YpesF_010100025297
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Yersinia pestis FV-1
Locus tag Position Score Sequence
Position: 6
Score: 4.9
Sequence: TTATCTAGACCA
Locus tag: YpesF_010100025297
YpesF_010100025297 6 4.9 TTATCTAGACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnF
Ortholog function: Transcriptional regulator for phosphonate utilization, GntR family
Escherichia coli str. K-12 substr. MG1655 b4102 6 5 TTGTCTACACAT
Citrobacter koseri ATCC BAA-895 CKO_03768 12 5 TTGTCTACACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04500 12 4.5 CTGTCCAGACAT
Enterobacter sp. 638 Ent638_0306 6 4.9 TTATCCAGACAT
Yersinia pestis KIM y0730 6 4.9 TTATCTAGACCA
Serratia proteamaculans 568 Spro_0522 9 5.2 TTATCTAGACAT
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