Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Streptococcus gallolyticus UCN34

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AdcR Zinc ion, (Zn2+) Zinc homeostasis 3 3
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 9 9
TF BirA Biotin Biotin biosynthesis 4 3
TF CcpA Fructose-1,6-bisphosphate; HPr, phosphocarrier protein Global catabolite repression 84 67
TF CcpB Sugar utilization 1 1
TF CelR CelB, cellobiose-specific PTS component EIIB; HPr, phosphocarrier protein Cellobiose utilization 2 2
TF CmbR O-acetyl-L-serine Cysteine metabolism 13 12
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 38 28
TF CopR Copper ion, (Cu2+) Copper homeostasis 1 2
TF CtsR Heat shock Heat shock response 5 5
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 3 4
TF FruR Fructose-6-phosphate Fructose utilization 1 3
TF GalR Galactose Galactose utilization 3 3
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 7 7
TF HomR O-acetyl-L-serine Methionine metabolism; Cysteine metabolism 4 4
TF HrcA Heat shock Heat shock response 3 4
TF LacR D-galactose-6-phosphate Lactose utilization; Galactose utilization 4 8
TF MalR Maltose Maltose utilization; Maltodextrin utilization 10 8
TF MalR2 Maltose Maltose utilization; Maltodextrin utilization 2 1
TF MleR L-malate Malate utilization 2 2
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 3 2
TF MtaR Homocysteine Methionine metabolism 11 10
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 5
TF NiaR Niacin NAD biosynthesis 4 3
TF NmlR Methylglyoxal; Formaldehyde; Nitric oxide Carbonyl stress response 3 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 4
TF PadR Ferulic acid; p-Coumaric acid Phenolic acid stress response 1 1
TF PdxR Pyridoxal-5-phosphate Pyridoxine biosynthesis 2 2
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Iron homeostasis; Manganese homeostasis; Oxidative stress response 11 6
TF PipR Phage infection protein 2 4
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 12 7
TF Rex NADH Energy metabolism 13 9
TF Rgg Cell wall metabolism 3 3
TF SAG1910 unknown 2 1
TF SPy1285 Transport 3 3
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 2
TF SgaR HPr, phosphocarrier protein; SgaB, ascorbate-specific PTS system EIIB component Ascorbate utilization 3 1
TF TreR Trehalose-6-phosphate Trehalose utilization 2 2
TF YjdR Multidrug resistance 1 1
TF YwzG Transport 1 1
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 3 2
RNA Glycine Glycine Glycine metabolism 2 2
RNA L10_leader Ribosome biogenesis 1 1
RNA L13_leader Ribosome biogenesis 1 1
RNA L19_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 1 1
RNA Purine Adenine; Guanine Purine metabolism 1 1
RNA PyrR PyrR Pyrimidine metabolism 4 3
RNA S15 Ribosome biogenesis 1 1
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(His) His-tRNA Amino acid metabolism 3 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 3 2
RNA T-box(Val) Val-tRNA Amino acid metabolism 1 1
RNA THF Tetrahydrofolate Folate metabolism 2 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA preQ1-II Pre-queuosine Queuosine biosynthesis 1 1
RNA yybP-ykoY 1 1
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