Regulons of Thermotoga lettingae TMO

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraR	Arabinose	Arabinose utilization	2	2
TF	BglR	Cellobiose	Beta-glucosides utilization	2	2
TF	CelR	Cellobiose	Cellobiose utilization	4	1
TF	ChiR	Chitobiose	Chitobiose utilization	3	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	4	1
TF	GalR	Galactose	Galactosides utilization	4	3
TF	GloR		Fucose-glucose oligosaccharide utilization	2	1
TF	HcpR	Nitric oxide	Nitrosative stress response	2	2
TF	HrcA	Heat shock	Heat shock response	3	3
TF	NiaR	Niacin	NAD biosynthesis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	4
TF	PhoB	Inorganic phosphate	Phosphate metabolism	2	1
TF	PuuR	Putrescine	Spermidine biosynthesis	1	2
TF	RbsR	Ribose	Ribose utilization	2	2
TF	Rex	NADH	Energy metabolism	8	6
TF	Rex1	NADH	Energy metabolism	1	1
TF	THA_1503		Multidrug resistance; Multidrug efflux	1	1
TF	TM0766		Hypothetical ABC transporter	1	1
TF	TM1030		Multidrug resistance	1	1
TF	TreR	Trehalose	Trehalose utilization	1	1
TF	UgpR		Possibly alpha-mannosides utilization	2	2
TF	UgtR		Sugar utilization	1	1
TF	XylR	Xylose; Glucose	Xylose utilization	3	2
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	4	3
RNA	His_leader		Histidine biosynthesis	1	1
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	L20_leader		Ribosome biogenesis	1	1
RNA	L21_leader		Ribosome biogenesis	1	1
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	3	1
RNA	Purine	Adenine; Guanine	Purine metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2
RNA	Trp_leader		Tryptophan biosynthesis	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --