Regulon of Cobalamin in Thermotoga lettingae TMO
Regulator type: | RNA regulatory element |
Name: | Cobalamin |
RFAM: | RF00174 |
Regulation mode: | |
Biological process: | Cobalamin biosynthesis |
Effector: | Adenosylcobalamin |
Regulog: | Cobalamin - Thermotogales |
Under regulation: | |
- Genes | 12 |
- Operons | 3 |

Member of regulog collections
- By taxonomy - Thermotogales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
Locus Tag | Name | Function | |
---|---|---|---|
Position: -167
Score: 133.3 Sequence: TATGATTTTCCACCT...
Locus tag: Tlet_1461
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Tlet_1462
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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sucC
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Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
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sucD
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Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
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Position: -234
Score: 113.2 Sequence: TGAATAAGAAGCGTC...
Locus tag: Tlet_1275
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Tlet_1274
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Tlet_1273
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATPase component BtuD
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Position: -582
Score: 105.3 Sequence: TGATAAAATAAATAT...
Locus tag: Tlet_1236
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Tlet_1237
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Tlet_1238
Name: null Funciton: Putative xylose isomerase domain protein
Locus tag: Tlet_1239
Name: cobS Funciton: Cobalamin synthase
Locus tag: Tlet_1240
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Tlet_1241
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Tlet_1242
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
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cobT
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Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
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cobU
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Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
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Putative xylose isomerase domain protein
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cobS
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Cobalamin synthase
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cbiB
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Adenosylcobinamide-phosphate synthase
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cobD
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L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
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btuR
|
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |