Regulon of Cobalamin in Thermotoga lettingae TMO

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Thermotogales
Under regulation:
- Genes	12
- Operons	3

Member of regulog collections

By taxonomy - Thermotogales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -167 Score: 133.3 Sequence: TATGATTTTCCACCT... Locus tag: Tlet_1461 Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Locus tag: Tlet_1462 Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
	Tlet_1461	sucC	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
	Tlet_1462	sucD	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Position: -234 Score: 113.2 Sequence: TGAATAAGAAGCGTC... Locus tag: Tlet_1275 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Tlet_1274 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Tlet_1273 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
	Tlet_1275	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Tlet_1274	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Tlet_1273	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
Position: -582 Score: 105.3 Sequence: TGATAAAATAAATAT... Locus tag: Tlet_1236 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Tlet_1237 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Tlet_1238 Name: null Funciton: Putative xylose isomerase domain protein Locus tag: Tlet_1239 Name: cobS Funciton: Cobalamin synthase Locus tag: Tlet_1240 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: Tlet_1241 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: Tlet_1242 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Tlet_1236	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Tlet_1237	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Tlet_1238		Putative xylose isomerase domain protein
	Tlet_1239	cobS	Cobalamin synthase
	Tlet_1240	cbiB	Adenosylcobinamide-phosphate synthase
	Tlet_1241	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	Tlet_1242	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD