Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Streptococcus mutans UA159

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AdcR Zinc ion, (Zn2+) Zinc homeostasis 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 9 9
TF BirA Biotin Biotin biosynthesis 2 1
TF CcpA Fructose-1,6-bisphosphate; HPr, phosphocarrier protein Global catabolite repression 84 52
TF CelR CelB, cellobiose-specific PTS component EIIB; HPr, phosphocarrier protein Cellobiose utilization 2 1
TF CmbR O-acetyl-L-serine Cysteine metabolism 11 10
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 36 24
TF CopR Copper ion, (Cu2+) Copper homeostasis 2 2
TF CtsR Heat shock Heat shock response 5 3
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 3 4
TF FruR Fructose-6-phosphate Fructose utilization 1 2
TF GalR Galactose Galactose utilization 2 2
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 6 7
TF GutR HPr, phosphocarrier protein; GutB, sorbitol-specific PTS EIIB component Sorbitol utilization 1 1
TF HomR O-acetyl-L-serine Methionine metabolism; Cysteine metabolism 4 6
TF HrcA Heat shock Heat shock response 5 3
TF LacR D-galactose-6-phosphate Lactose utilization; Galactose utilization 2 1
TF MalR Maltose Maltose utilization; Maltodextrin utilization 6 4
TF MleR L-malate Malate utilization 2 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 4 1
TF MtaR Homocysteine Methionine metabolism 11 9
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 5
TF NiaR Niacin NAD biosynthesis 3 2
TF NigR Nigerose-6-phosphate Nigerose utilization 1 2
TF NmlR Methylglyoxal; Formaldehyde; Nitric oxide Carbonyl stress response 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 4
TF PdxR Pyridoxal-5-phosphate Pyridoxine biosynthesis 2 2
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Iron homeostasis; Manganese homeostasis; Oxidative stress response 12 5
TF PflR Formate metabolism 3 3
TF PipR Phage infection protein 2 4
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 10 4
TF Rex NADH Energy metabolism 15 12
TF SAG1910 unknown 3 3
TF SMU640c 2 2
TF SPy1285 Transport 3 3
TF ScrR Sucrose-6-phosphate Sucrose utilization 3 2
TF SgaR HPr, phosphocarrier protein; SgaB, ascorbate-specific PTS system EIIB component Ascorbate utilization 3 2
TF TagR Tagatose-6-phosphate Tagatose utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 2 2
TF YjdR Multidrug resistance 1 1
TF YwzG Transport 1 1
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 1 1
RNA L10_leader Ribosome biogenesis 1 1
RNA L13_leader Ribosome biogenesis 1 1
RNA L19_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 2 1
RNA PyrR PyrR Pyrimidine metabolism 3 2
RNA S15 Ribosome biogenesis 1 1
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Asn) Asn-tRNA Amino acid metabolism 1 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(His) His-tRNA Amino acid metabolism 2 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 3 1
RNA T-box(Val) Val-tRNA Amino acid metabolism 2 1
RNA THF Tetrahydrofolate Folate metabolism 2 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
RNA preQ1-II Pre-queuosine Queuosine biosynthesis 1 1
RNA yybP-ykoY 1 1
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