Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Aeromonas salmonicida subsp. salmonicida A449

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AHA_3778 1 1
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 7 12
TF BirA Biotin Biotin biosynthesis 2 2
TF CueR Copper ion, (Cu+) Copper resistance 1 2
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 7 9
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 4 3
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Fructose utilization 2 4
TF Fur Iron ion, (Fe2+) Iron homeostasis 28 28
TF GntR Gluconate Gluconate utilization 3 5
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 22 21
TF HutC cis-Urocanic acid Histidine utilization 3 3
TF HypR Proline; 4-hydroxyproline Proline and 4-hydrohyproline utilization 2 3
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 2
TF LexA DNA damage SOS response 11 12
TF LiuR Branched-chain amino acid degradation 7 10
TF MerR Mercury ion, (Hg2+) Mercury resistance 1 1
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 14 22
TF MetR Homocysteine Methionine biosynthesis 2 2
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 3
TF NarP Nitrite; Nitrate Nitrate and nitrite respiration 16 18
TF NorR Nitric oxide Nitrosative stress response 3 6
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 6
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 3 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 5 6
TF PdhR Pyruvate Pyruvate metabolism 1 2
TF PhnR1 2-aminoethylphosphonate 2-aminoethylphosphonate utilization 2 4
TF PhrR Adenosylcobalamin; Blue light Light-dependent DNA repair 1 2
TF PsrA Oleate Fatty acid degradation 4 5
TF RbsR Ribose Ribose utilization 2 1
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 3
TF SgaR Ascorbate-6-phosphate Ascorbate utilization 2 4
TF SoxR Paraquat Superoxide stress response 1 1
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 6 6
TF YdcR 1 1
TF ZntR Zinc ion, (Zn2+) Zinc resistance 2 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 3
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis 2 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
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