Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Aeromonas salmonicida subsp. salmonicida A449

Properties
Regulator type: Transcription factor
TF locus tag: ASA_2776
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes 49
- Operons 15
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 53 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -56
Score: 4.1
Sequence: TACCTCTCTCTAGCTA
Position: -42
Score: 4.4
Sequence: TACTACTATATTGGTA
Locus tag: ASA_0266
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: ASA_0265
Name: torZ
Funciton: Biotin sulfoxide reductase
torY
Biotin sulfoxide reductase, cytochrome c-type
torZ
Biotin sulfoxide reductase

Position: -286
Score: 4.4
Sequence: TACCCCTAAGGGGATT
Locus tag: ASA_2351
Name: focA
Funciton: Formate transporter, FNT family
Locus tag: ASA_2352
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA
Formate transporter, FNT family
pflB
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -22
Score: 4.6
Sequence: TAACCCCTAATAGGTA
Locus tag: ASA_4147
Name: napF2
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
napF2
Periplasmic nitrate reductase, ferredoxin-type protein NapF

Position: -66
Score: 4.7
Sequence: TACCACCTAAGTGATA
Locus tag: ASA_3771
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -148
Score: 4.4
Sequence: TACCTATTTATGTATA
Position: -113
Score: 4.6
Sequence: TACCCCTGAGGAGATA
Locus tag: ASA_0196
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: ASA_0195
Name: ASA_0195
Funciton: Hypothetical protein
Locus tag: ASA_0194
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: ASA_0193
Name: nirC
Funciton: Nitrite transporter, FNT family
Locus tag: ASA_0192
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB
Nitrite reductase large subunit (EC 1.7.1.4)
ASA_0195
Hypothetical protein
nirD
Nitrite reductase small subunit (EC 1.7.1.4)
nirC
Nitrite transporter, FNT family
cysG
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -159
Score: 4.5
Sequence: TACCCATTTGGTAATA
Locus tag: ASA_2321
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: ASA_2322
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: ASA_2323
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: ASA_2324
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: ASA_2325
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: ASA_2326
Name: nrfF
Funciton: Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly
Locus tag: ASA_2327
Name: nrfG
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
nrfA
Nitrite reductase, cytochrome c(552)
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
Nitrite reductase, Fe-S center subunit
nrfD
Nitrite reductase, NrfD component
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
nrfF
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly
nrfG
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG

Position: -101
Score: 4.4
Sequence: TACTCATAAATAGGTA
Locus tag: ASA_3913
Name: nhaP
Funciton: Predicted Na+/H+ antiporter
nhaP
Predicted Na+/H+ antiporter

Position: -82
Score: 4.2
Sequence: TATCTCCCTGGTGGTA
Locus tag: ASA_2773
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: ASA_2772
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: ASA_2771
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: ASA_2770
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: ASA_2769
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: ASA_2768
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: ASA_2767
Name: napC
Funciton: Cytochrome c-type protein NapC
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -33
Score: 4.8
Sequence: TACCACTTAATGGCTA
Locus tag: ASA_2902
Name: adhB
Funciton: Alcohol dehydrogenase, iron-containing (EC 1.1.1.1)
adhB
Alcohol dehydrogenase, iron-containing (EC 1.1.1.1)

Position: -89
Score: 4.7
Sequence: TAACCCTTTAGGGCTA
Locus tag: ASA_2882
Name: dcuB
Funciton: C4-dicarboxylate transporter
dcuB
C4-dicarboxylate transporter

Position: -122
Score: 4.9
Sequence: TACCCCTTATTAGATA
Locus tag: ASA_2368
Name: dcuC
Funciton: C4-dicarboxylate transporter
dcuC
C4-dicarboxylate transporter

Position: -296
Score: 4.8
Sequence: TACCCATTTTGGGGTA
Locus tag: ASA_3199
Name: nqrA
Funciton: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: ASA_3198
Name: nqrB
Funciton: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: ASA_3197
Name: nqrC
Funciton: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: ASA_3196
Name: nqrD
Funciton: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: ASA_3195
Name: nqrE
Funciton: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: ASA_3194
Name: nqrF
Funciton: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
nqrA
Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
nqrB
Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
nqrC
Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
nqrD
Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
nqrE
Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
nqrF
Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)

Position: -124
Score: 4.8
Sequence: TACCCCTTAAGTGGCA
Locus tag: ASA_0418
Name: pdhR
Funciton: Pyruvate utilization transcriptional regulator PdhR, GntR family
Locus tag: ASA_0419
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: ASA_0420
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: ASA_0421
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
pdhR
Pyruvate utilization transcriptional regulator PdhR, GntR family
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)

Position: -206
Score: 4.8
Sequence: TACCCCCTTGTGGATA
Locus tag: ASA_1788
Name: hybO
Funciton: Hydrogenase II, small subunit (EC 1.12.99.6)
Locus tag: ASA_1789
Name: hybA
Funciton: Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
Locus tag: ASA_1790
Name: hybB
Funciton: Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
Locus tag: ASA_1791
Name: hybC
Funciton: Hydrogenase II, large subunit (EC 1.12.99.6)
Locus tag: ASA_1792
Name: hybD
Funciton: Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
Locus tag: ASA_1793
Name: hybE
Funciton: Hydrogenase II, maturation chaperone (EC 1.12.99.6)
hybO
Hydrogenase II, small subunit (EC 1.12.99.6)
hybA
Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
hybB
Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
hybC
Hydrogenase II, large subunit (EC 1.12.99.6)
hybD
Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
hybE
Hydrogenase II, maturation chaperone (EC 1.12.99.6)

Position: -315
Score: 4
Sequence: TAATTCTTATTAAATA
Position: -19
Score: 4.3
Sequence: TATCCCTAAGGAGGCA
Locus tag: ASA_1105
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: ASA_1104
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: ASA_1103
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: ASA_1102
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)
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