Regulon of NrdR in Aeromonas salmonicida subsp. salmonicida A449
| Regulator type: | Transcription factor |
| TF locus tag: | ASA_0978 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -202
Score: 4.3 Sequence: ACACCACATATAGGGA
Position: -171
Score: 5.1 Sequence: CACCTATATGTTGTGT
Locus tag: ASA_1222
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: ASA_1223
Name: null Funciton: hypothetical protein
Locus tag: ASA_1224
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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nrdD
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Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
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hypothetical protein
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nrdG
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Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Position: -95
Score: 5.5 Sequence: ATACTATATATTGTGT
Position: -64
Score: 4.5 Sequence: TCACTATTAGTTGTGT
Locus tag: ASA_3420
Name: nrdJa Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Locus tag: ASA_3419
Name: nrdJb Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1) |
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nrdJa
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Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
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nrdJb
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Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1)
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Position: -146
Score: 4.2 Sequence: CCTCACTATCTTGTAG
Position: -115
Score: 5.4 Sequence: ACACTATATCTTGTGA
Locus tag: ASA_1946
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: ASA_1945
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: ASA_1944
Name: yfaE Funciton: Ferredoxin |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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yfaE
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Ferredoxin
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |