Regulon of LexA in Aeromonas salmonicida subsp. salmonicida A449
| Regulator type: | Transcription factor |
| TF locus tag: | ASA_4206 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -69
Score: 5.9 Sequence: TACTGTATGAATAGACAGTA
Locus tag: ASA_3809
Name: recA Funciton: Recombinase A
Locus tag: ASA_3810
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -35
Score: 4.3 Sequence: ATTTGGACATATTTACAGTG
Locus tag: ASA_4113
Name: recG Funciton: ATP-dependent DNA helicase RecG (EC 3.6.1.-) |
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recG
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ATP-dependent DNA helicase RecG (EC 3.6.1.-)
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Position: -36
Score: 5.5 Sequence: TACTGTTCGCATATACAGTA
Locus tag: ASA_0267
Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2) |
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topB
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DNA topoisomerase III (EC 5.99.1.2)
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Position: -73
Score: 4.8 Sequence: CACTGTATGAACGTACAATA
Locus tag: ASA_2190
Name: polB Funciton: DNA polymerase II (EC 2.7.7.7) |
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polB
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DNA polymerase II (EC 2.7.7.7)
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Position: -74
Score: 5.1 Sequence: TGCTGGATACTTATCCAGTT
Locus tag: ASA_0735
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: ASA_0736
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -67
Score: 5.6 Sequence: TACTGTATGGAAAACCAGTA
Position: -45
Score: 5.5 Sequence: TACTGGATGCATACACAGTA
Locus tag: ASA_2999
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -49
Score: 5.3 Sequence: CACTGTATATACTGCCAGTG
Position: -29
Score: 5.5 Sequence: TGCTGTATAAAAAAACAGGT
Locus tag: ASA_4206
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -72
Score: 5.2 Sequence: ACCTGTCTATTCATCCAGTA
Locus tag: ASA_3999
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: 11
Score: 5.2 Sequence: AACTGTTTATTCGTACAGTG
Locus tag: ASA_3190
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -26
Score: 5.4 Sequence: GCCTGTATAAATAAACAGGA
Locus tag: ASA_4174
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |