Regulons of Roseiflexus sp. RS-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcrR		Multidrug efflux; Multidrug resistance	2	1
TF	Cagg_3094		Creatinine utilization	2	2
TF	Caur_3401		Multidrug resistance; Multidrug efflux	2	1
TF	Caur_3448		Sugar utilization	1	2
TF	Caur_3587			2	2
TF	FetR	Iron ion, (Fe2+)	Iron homeostasis	3	3
TF	HcpR	Nitric oxide	Nitrosative stress response	1	1
TF	HrcA	Heat shock	Heat shock response	2	3
TF	LexA	DNA damage	SOS response	14	11
TF	MhpR		Utilization of aromatic compounds	2	1
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	3	3
TF	NagR	N-acetylglucosamine	N-acetylglucosamine utilization	3	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	5	5
TF	Rcas_2304		Amino acid utilization	1	1
TF	Rcas_3562		Alpha-galactosides utilization	1	1
TF	Rex	NADH	Energy metabolism	13	11
TF	RhaR	Rhamnose	Rhamnose utilization	1	3
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	6	1
TF	Zur2	Zinc ion, (Zn2+)	Zinc homeostasis	5	5
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	4	3
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	2	2
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	7	2
RNA	T-box(Gly)	Gly-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	1	1
RNA	T-box(Phe)	Phe-tRNA	Amino acid metabolism	1	1
RNA	T-box(Thr)	Thr-tRNA	Amino acid metabolism	1	1
RNA	T-box(Trp)	Trp-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	4
RNA	glmS	Glucosamine-6-phosphate	Amino sugar metabolism	1	1

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --