Regulons of Roseiflexus sp. RS-1
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AcrR |
|
Multidrug efflux; Multidrug resistance |
2 |
1 |
| TF |
Cagg_3094 |
|
Creatinine utilization |
2 |
2 |
| TF |
Caur_3401 |
|
Multidrug resistance; Multidrug efflux |
2 |
1 |
| TF |
Caur_3448 |
|
Sugar utilization |
1 |
2 |
| TF |
Caur_3587 |
|
|
2 |
2 |
| TF |
FetR |
Iron ion, (Fe2+) |
Iron homeostasis |
3 |
3 |
| TF |
HcpR |
Nitric oxide |
Nitrosative stress response |
1 |
1 |
| TF |
HrcA |
Heat shock |
Heat shock response |
2 |
3 |
| TF |
LexA |
DNA damage |
SOS response |
14 |
11 |
| TF |
MhpR |
|
Utilization of aromatic compounds |
2 |
1 |
| TF |
MntR |
Manganese ion, (Mn2+) |
Manganese homeostasis |
3 |
3 |
| TF |
NagR |
N-acetylglucosamine |
N-acetylglucosamine utilization |
3 |
1 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
1 |
| TF |
NrtR |
Adenosine diphosphate ribose |
NAD biosynthesis |
5 |
5 |
| TF |
Rcas_2304 |
|
Amino acid utilization |
1 |
1 |
| TF |
Rcas_3562 |
|
Alpha-galactosides utilization |
1 |
1 |
| TF |
Rex |
NADH |
Energy metabolism |
13 |
11 |
| TF |
RhaR |
Rhamnose |
Rhamnose utilization |
1 |
3 |
| TF |
SufR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
6 |
1 |
| TF |
Zur2 |
Zinc ion, (Zn2+) |
Zinc homeostasis |
5 |
5 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
4 |
3 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
2 |
2 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
1 |
2 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
SAM |
S-adenosylmethionine |
Methionine biosynthesis |
7 |
2 |
| RNA |
T-box(Gly) |
Gly-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Ile) |
Ile-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Phe) |
Phe-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Thr) |
Thr-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Trp) |
Trp-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
4 |
| RNA |
glmS |
Glucosamine-6-phosphate |
Amino sugar metabolism |
1 |
1 |
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