Regulon of TPP in Roseiflexus sp. RS-1
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Chloroflexia |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -221
Score: 60.4 Sequence: TACCGTTCCGTAGGG...
Locus tag: RoseRS_1028
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: RoseRS_1027
Name: null Funciton: hypothetical protein |
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tenA
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Thiaminase II (EC 3.5.99.2)
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hypothetical protein
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Position: -218
Score: 59.6 Sequence: AGGGGAGCCAGGAGA...
Locus tag: RoseRS_0668
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: RoseRS_0669
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RoseRS_0670
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: RoseRS_0671
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component |
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COG0011
|
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
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thiX
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Hydroxymethylpyrimidine ABC transporter, transmembrane component
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thiY
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Hydroxymethylpyrimidine ABC transporter, substrate-binding component
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thiZ
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Hydroxymethylpyrimidine ABC transporter, ATPase component
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Position: -183
Score: 68.2 Sequence: ACGGCGCCACTGGGG...
Locus tag: RoseRS_1927
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: RoseRS_1926
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: RoseRS_1925
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: RoseRS_1924
Name: ecfA Funciton: ATPase component of general energizing module of ECF transporters
Locus tag: RoseRS_1923
Name: ecfA Funciton: ATPase component of general energizing module of ECF transporters
Locus tag: RoseRS_1922
Name: ecfT Funciton: Transmembrane component of general energizing module of ECF transporters
Locus tag: RoseRS_1921
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiW
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Substrate-specific component ThiW of predicted thiazole ECF transporter
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ecfA
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ATPase component of general energizing module of ECF transporters
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ecfA
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ATPase component of general energizing module of ECF transporters
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ecfT
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Transmembrane component of general energizing module of ECF transporters
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Position: -175
Score: 73.8 Sequence: TAAGCGTGTATGAGG...
Locus tag: RoseRS_2771
Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX |
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cytX
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Predicted hydroxymethylpyrimidine transporter CytX
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |