Regulon of LexA in Roseiflexus sp. RS-1

Properties
Regulator type:	Transcription factor
TF locus tag:	RoseRS_0427
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Chloroflexia
Statistics of regulated genes:
- Genes	13
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 52 sites [see more]

Member of regulog collections

By taxonomy - Chloroflexi
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -135 Score: 4.9 Sequence: TAGAACAAATGTTCGA Locus tag: RoseRS_3028 Name: Cagg_1574 Funciton: Conserved hypothetical protein Locus tag: RoseRS_3029 Name: Cagg_1573 Funciton: Conserved hypothetical protein
	RoseRS_3028	Cagg_1574	Conserved hypothetical protein
	RoseRS_3029	Cagg_1573	Conserved hypothetical protein
Position: -34 Score: 4.4 Sequence: TCGCATACGTGTTCGC Locus tag: RoseRS_4548 Name: mutL Funciton: DNA mismatch repair protein MutL
	RoseRS_4548	mutL	DNA mismatch repair protein MutL
Position: -34 Score: 4.2 Sequence: ACGCGCATCTGTTCGA Locus tag: RoseRS_0905 Name: sbcC Funciton: Exonuclease SbcC
	RoseRS_0905	sbcC	Exonuclease SbcC
Position: -47 Score: 4.7 Sequence: TAGAACATCGGTACGA Locus tag: RoseRS_3706 Name: mutS Funciton: DNA mismatch repair protein MutS
	RoseRS_3706	mutS	DNA mismatch repair protein MutS
Position: -103 Score: 4 Sequence: TCGCACGTCTGTTCAT Locus tag: RoseRS_3438 Name: uvrA Funciton: Excinuclease ABC subunit A
	RoseRS_3438	uvrA	Excinuclease ABC subunit A
Position: -115 Score: 4.3 Sequence: TGGAACATGCATGCTA Locus tag: RoseRS_0828 Name: ssb Funciton: Single-stranded DNA-binding protein
	RoseRS_0828	ssb	Single-stranded DNA-binding protein
Position: -24 Score: 4.7 Sequence: CCGCACACGTGTGCGG Locus tag: RoseRS_2425 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	RoseRS_2425	ruvB	Holliday junction DNA helicase RuvB
Position: -86 Score: 4.1 Sequence: ACGAACACCCGTTCAC Locus tag: RoseRS_0046 Name: Cagg_3684 Funciton: Conserved hypothetical protein Locus tag: RoseRS_0047 Name: gyrB Funciton: DNA gyrase subunit B (EC 5.99.1.3)
	RoseRS_0046	Cagg_3684	Conserved hypothetical protein
	RoseRS_0047	gyrB	DNA gyrase subunit B (EC 5.99.1.3)
Position: -137 Score: 5 Sequence: TAGCCCACTTGTGCGA Position: -120 Score: 4.3 Sequence: AAGAACCTTCGTGCTA Locus tag: RoseRS_3118 Name: recA Funciton: Recombinase A Locus tag: RoseRS_3117 Name: recX Funciton: Regulatory protein RecX
	RoseRS_3118	recA	Recombinase A
	RoseRS_3117	recX	Regulatory protein RecX
Position: -40 Score: 4.6 Sequence: CCGAACACCTGTGCAG Locus tag: RoseRS_2821 Name: parB Funciton: Chromosome partitioning protein ParB
	RoseRS_2821	parB	Chromosome partitioning protein ParB

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Roseiflexus sp. RS-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --