Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Roseiflexus sp. RS-1

Properties
Regulator type: Transcription factor
TF locus tag: RoseRS_4103
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Chloroflexia
Statistics of regulated genes:
- Genes 23
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 49 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -106
Score: 3.8
Sequence: CTGTTCCATCCATCACAA
Locus tag: RoseRS_0005
Name: fpr
Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
RoseRS_0005
fpr
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Position: -73
Score: 5
Sequence: TTGTGATTATTATTGCAA
Position: -51
Score: 5.1
Sequence: TCGTGAAGTGTATCACGA
Locus tag: RoseRS_0596
Name: Cagg_2669
Funciton: Cytochrome c family protein
Locus tag: RoseRS_0597
Name: Cagg_2670
Funciton: hypothetical protein
RoseRS_0596
Cagg_2669
Cytochrome c family protein
RoseRS_0597
Cagg_2670
hypothetical protein
Position: -40
Score: 4.6
Sequence: TTGTGCAAGATTTCACGT
Locus tag: RoseRS_2002
Name: Cagg_1949
Funciton: GCN5-related N-acetyltransferase
RoseRS_2002
Cagg_1949
GCN5-related N-acetyltransferase
Position: -44
Score: 4.4
Sequence: TTGTGAAAGTGTTCTCAA
Locus tag: RoseRS_0518
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: RoseRS_0517
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: RoseRS_0516
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: RoseRS_0515
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: RoseRS_0514
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: RoseRS_0513
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: RoseRS_0512
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: RoseRS_0511
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
RoseRS_0518
atpB
ATP synthase A chain (EC 3.6.3.14)
RoseRS_0517
atpE
ATP synthase C chain (EC 3.6.3.14)
RoseRS_0516
atpF
ATP synthase B chain (EC 3.6.3.14)
RoseRS_0515
atpH
ATP synthase delta chain (EC 3.6.3.14)
RoseRS_0514
atpA
ATP synthase alpha chain (EC 3.6.3.14)
RoseRS_0513
atpG
ATP synthase gamma chain (EC 3.6.3.14)
RoseRS_0512
atpD
ATP synthase beta chain (EC 3.6.3.14)
RoseRS_0511
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -48
Score: 5.3
Sequence: TTGTTCAGTATTTCACAA
Locus tag: RoseRS_1698
Name: hepT
Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
RoseRS_1698
hepT
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Position: -157
Score: 4.3
Sequence: TAGTGCTACACTTCACAT
Locus tag: RoseRS_4103
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
RoseRS_4103
rex
Redox-sensitive transcriptional regulator Rex
Position: -131
Score: 4.1
Sequence: TCGTGCAACTTTTCACGT
Locus tag: RoseRS_2263
Name: cyoA
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: RoseRS_2264
Name: cyoB
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: RoseRS_2265
Name: cyoC
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Locus tag: RoseRS_2266
Name: cyoD
Funciton: caa(3)-type oxidase, subunit IV
Locus tag: RoseRS_2267
Name: cyoE
Funciton: CtaG protein
RoseRS_2263
cyoA
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
RoseRS_2264
cyoB
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
RoseRS_2265
cyoC
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
RoseRS_2266
cyoD
caa(3)-type oxidase, subunit IV
RoseRS_2267
cyoE
CtaG protein
Position: -116
Score: 4.7
Sequence: TTGTGAAGTTTGACACAA
Locus tag: RoseRS_0224
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
RoseRS_0224
ctaB
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
Position: -42
Score: 5.3
Sequence: TCGTGATGTGTTTCACGA
Locus tag: RoseRS_2496
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
RoseRS_2496
pckA
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Position: -56
Score: 4.5
Sequence: TTGTGAATGTTATCACCT
Locus tag: RoseRS_3257
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: RoseRS_3256
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
RoseRS_3257
bchY
Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
RoseRS_3256
bchZ
Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
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