Profile of regulator Rex in Chloroflexia
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Chloroflexia |
Member of regulog collections
- By trascription factor - Rex
- By taxonomy - Chloroflexi
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Chloroflexus aggregans DSM 9485 | |||||
| Cagg_2469 | fpr | -56 | 5.2 | CTGTGCTGTATATCACAA | |
| Cagg_0775 | nuoM3 | -295 | 4.9 | ATGTGAGGTATGTCACAA | |
| Cagg_0500 | ndh | -33 | 5.3 | TTGTGAACAATTTCACCA | |
| Cagg_3394 | acs | -56 | 5.3 | TTGTTATATCTATCACAA | |
| Cagg_2669 | Cagg_2669 | -28 | 5 | TCGTGATGTTTGTCACGA | |
| Cagg_2026 | Cagg_2669 | -56 | 4.7 | AAGTGAATAATATCACTA | |
| Cagg_2026 | Cagg_2669 | -145 | 4.5 | GTGACACATATTTCACAA | |
| Cagg_1949 | Cagg_1949 | -68 | 5.1 | ATGTGGTATATTTCACAT | |
| Cagg_0991 | atpB | -105 | 4.3 | TTGTGAAAGACTGAACAA | |
| Cagg_1631 | nuoA | -55 | 5.2 | TTGTGATATACTTCTCAT | |
| Cagg_0899 | hepT | -125 | 5.4 | TTGTGGCGAATATCACAA | |
| Cagg_0157 | rex | -47 | 4.7 | TTGTGCTACACTTCACAT | |
| Chloroflexus sp. Y-400-fl | |||||
| Chy400_1671 | fpr | -61 | 4.5 | CTGTGCTGTAAATCACAA | |
| Chy400_3880 | nuoM3 | -250 | 5.2 | ACGTGATATTTATCACAA | |
| Chy400_3620 | ndh | -33 | 5.3 | TTGTGAATGATTTCACTA | |
| Chy400_0662 | acs | -54 | 5.4 | TTGTTATCTATATCACAA | |
| Chy400_1583 | Cagg_1949 | -63 | 4.8 | ATGTGGTATATTTCACAC | |
| Chy400_3293 | atpB | -109 | 4 | TTGTGAAAGATCGAACAA | |
| Chy400_4040 | hepT | -123 | 5.7 | TTGTGGTGAATATCACAA | |
| Chy400_3940 | rex | -55 | 4.7 | TTGTGCTACACTTCACAT | |
| Chy400_2142 | nuoA | -54 | 5.2 | TTGTGATATACTTCTCAT | |
| Chy400_0034 | null | -34 | 4.1 | TCGTGAAAGAATCCACGA | |
| Herpetosiphon aurantiacus ATCC 23779 | |||||
| Haur_4980 | nuoA | -117 | 5.1 | CTGTGATATACTTCGCAA | |
| Haur_2345 | hepT | -44 | 4.6 | ACGCGATAACTTTCACAA | |
| Haur_4427 | rex | -121 | 4.3 | TTGCACTATACTTCACAA | |
| Haur_0429 | pckA | -117 | 4.1 | TTGTGAAGTTTTTCCTTA | |
| Roseiflexus castenholzii DSM 13941 | |||||
| Rcas_2846 | pckA | -42 | 3.9 | TCGTGATGTGTTGCACGG | |
| Rcas_2088 | nuoA | -64 | 5 | TTGTGATATACTCAACAA | |
| Rcas_4255 | fpr | -115 | 3.9 | CTGTTCCTTTCATCACAA | |
| Rcas_3898 | Cagg_2669 | -53 | 5.2 | TCGTGAAGCATATCACGA | |
| Rcas_3898 | Cagg_2669 | -79 | 5.3 | TTGTGATTATTATTACAA | |
| Rcas_3936 | Cagg_1949 | -44 | 4.3 | TTGTGCAAGATTTCACGG | |
| Rcas_1271 | atpB | -36 | 4.4 | TTGTGAAAGTGTTCTCAA | |
| Rcas_2323 | hepT | -48 | 5.8 | TTGTTATGTATTTCACAA | |
| Rcas_1392 | rex | -109 | 4.3 | TAGTGCTACACTTCACAT | |
| Rcas_3744 | bchY | -69 | 4.7 | TTGTGATGTTTGTCACCT | |
| Rcas_3558 | cyoA | -127 | 4.1 | TCGTGCAACTTTTCACGT | |
| Rcas_4304 | ctaB | -113 | 4.7 | TTGTGAAGTTTGACACAA | |
| Roseiflexus sp. RS-1 | |||||
| RoseRS_2263 | cyoA | -131 | 4.1 | TCGTGCAACTTTTCACGT | |
| RoseRS_3257 | bchY | -56 | 4.5 | TTGTGAATGTTATCACCT | |
| RoseRS_0005 | fpr | -106 | 3.8 | CTGTTCCATCCATCACAA | |
| RoseRS_0596 | Cagg_2669 | -51 | 5.1 | TCGTGAAGTGTATCACGA | |
| RoseRS_0596 | Cagg_2669 | -73 | 5 | TTGTGATTATTATTGCAA | |
| RoseRS_2002 | Cagg_1949 | -40 | 4.6 | TTGTGCAAGATTTCACGT | |
| RoseRS_0518 | atpB | -44 | 4.4 | TTGTGAAAGTGTTCTCAA | |
| RoseRS_1698 | hepT | -48 | 5.3 | TTGTTCAGTATTTCACAA | |
| RoseRS_4103 | rex | -157 | 4.3 | TAGTGCTACACTTCACAT | |
| RoseRS_2496 | pckA | -42 | 5.3 | TCGTGATGTGTTTCACGA | |
| RoseRS_0224 | ctaB | -116 | 4.7 | TTGTGAAGTTTGACACAA | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |