Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Burkholderia sp. 383

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BPSL1086 Metabolite transport 2 2
TF BPSL1304 Sugar utilization 1 1
TF BPSS0970 1 1
TF BPSS1200 1 1
TF Bamb_1959 Alkanesulfonates utilization 2 2
TF Bamb_2736 Sugar utilization 2 2
TF Bamb_3558 1 1
TF Bamb_4155 Sugar utilization 1 1
TF Bamb_4265 1 1
TF Bamb_5788 1 1
TF Bcep18194_A4479 2 2
TF Bcep18194_B0628 1 1
TF Bphy_4252 Lactate utilization; Glycolate utilization 2 4
TF Bphy_4590 Sugar utilization 2 2
TF Bphy_6994 NULL 1 1
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF CueR Copper ion, (Cu+) Copper resistance 2 1
TF EutR 2 3
TF FadP Fatty acid degradation 14 10
TF FdsR Formate Formate oxydation 2 4
TF GabR Gamma-aminobutyric acid Gamma-aminobutyrate utilization 2 2
TF GguR Glucarate utilization; Galactarate utilization 10 11
TF GlcC Glycolate Glycolate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 5
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 8 9
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 10 10
TF LiuQ Branched-chain amino acid degradation 3 4
TF LldR L-lactate Lactate utilization 2 2
TF MetR Homocysteine Methionine biosynthesis 4 4
TF ModE Molybdate Molybdenum homeostasis 2 1
TF ModE2 Molybdate Molybdopterin biosynthesis 2 2
TF NagQ N-acetylglucosamine N-acetylglucosamine utilization 1 1
TF NmlR Diamide Carbonyl stress response 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 4 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 4 4
TF PdxQ3 Metabolite transport; Pyridoxine/pyridoxal homeostasis 2 1
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 2 2
TF PdxW2 Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PhnR2 2-aminoethylphosphonate 2-aminoethylphosphonate utilization 4 3
TF PsrA Oleate Fatty acid degradation 2 2
TF PtxS 2-keto-D-gluconate 2-ketogluconate utilization 3 2
TF RbsR Ribose Ribose utilization 1 1
TF RutR Uracil Pyrimidine utilization 2 2
TF SdhR Tricarboxylic acid cycle 6 5
TF SoxR Paraquat Superoxide stress response 3 3
TF TauR Taurine Taurine utilization 5 3
TF UdhR Glucuronate utilization; Galacturonate utilization 3 3
TF UraR Uracil Pyrimidine utilization 1 2
TF UreR 2 4
TF UxuR3 Glucuronate utilization 2 6
TF YdcR 4 3
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 4
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 8 6
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 2 2
RNA Glycine Glycine Glycine metabolism 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA mini-ykkC Multidrug resistance 1 1
RNA sucA Tricarboxylic acid cycle 1 1
RNA yybP-ykoY 2 2
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