Regulon of GguR in Burkholderia sp. 383
| Regulator type: | Transcription factor |
| TF locus tag: | Bcep18194_A4276 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | |
| Regulog: | GguR - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By trascription factor - GguR
- By TF family - GntR/Others
- By pathway - Glucarate utilization
- By pathway - Galactarate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -196
Score: 5 Sequence: CAGTCGTCAGATAACAT
Locus tag: Bcep18194_B1871
Name: exuT Funciton: Hexuronate transporter, MFS family
Locus tag: Bcep18194_B1872
Name: agl Funciton: Alpha-glucosidase (EC 3.2.1.20)
Locus tag: Bcep18194_B1873
Name: omp Funciton: Outer membrane porin protein 32 precursor |
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exuT
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Hexuronate transporter, MFS family
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agl
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Alpha-glucosidase (EC 3.2.1.20)
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omp
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Outer membrane porin protein 32 precursor
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Position: -239
Score: 5 Sequence: ACGTCGTCGTATGACGT
Locus tag: Bcep18194_B0328
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) |
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kgsD
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Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
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Position: -107
Score: 5.2 Sequence: CAGTCGTCGGATGACTT
Locus tag: Bcep18194_A4276
Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family |
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gguR
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Predicted D-glucarate or D-galactorate utilization regulator, GntR family
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Position: -154
Score: 4.8 Sequence: ATGTCATCGTACAACGA
Position: -48
Score: 4.9 Sequence: ATGTCGTATGATGACTA
Locus tag: Bcep18194_B0333
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) |
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garD
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D-galactarate dehydratase (EC 4.2.1.42)
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Position: -347
Score: 4.8 Sequence: CAGTCATCCTATGACAA
Locus tag: Bcep18194_C7436
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Bcep18194_C7435
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Bcep18194_C7434
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component |
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uxuP
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Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
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uxuQ
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Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
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uxuM
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Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
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Position: -25
Score: 5 Sequence: ACGTCATACGACGACGT
Locus tag: Bcep18194_B0327
Name: gudP Funciton: D-glucarate permease |
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gudP
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D-glucarate permease
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Position: -268
Score: 5.2 Sequence: AAGTCATCCGACGACTG
Locus tag: Bcep18194_A4275
Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40) |
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gudD
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Glucarate dehydratase (EC 4.2.1.40)
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Position: -198
Score: 4.9 Sequence: TAGTCATCATACGACAT
Position: -92
Score: 4.8 Sequence: TCGTTGTACGATGACAT
Locus tag: Bcep18194_B0332
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) |
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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Position: -89
Score: 5.3 Sequence: ATGTCATACGACGACAT
Locus tag: Bcep18194_A5498
Name: gguT Funciton: Predicted hexarate transporter
Locus tag: Bcep18194_A5499
Name: uxuF Funciton: Predicted uronate lactonase, PF10282 family |
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gguT
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Predicted hexarate transporter
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uxuF
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Predicted uronate lactonase, PF10282 family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |