Regulon of SoxR in Burkholderia sp. 383
| Regulator type: | Transcription factor |
| TF locus tag: | Bcep18194_B1003 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Regulog: | SoxR - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By trascription factor - SoxR
- By TF family - MerR
- By effector - Paraquat
- By pathway - Superoxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -42
Score: 6.7 Sequence: AGTTGAAGTTAACTTCAAGT
Locus tag: Bcep18194_B1003
Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family |
|||
|
soxR
|
Redox-sensitive transcriptional activator, MerR family
|
||
|
Position: -58
Score: 6.7 Sequence: ACTTGAAGTTAACTTCAACT
Locus tag: Bcep18194_B1004
Name: cmeA Funciton: RND transporter, membrane fusion protein
Locus tag: Bcep18194_B1005
Name: cmeB Funciton: RND transporter, inner membrane protein
Locus tag: Bcep18194_B1006
Name: cmeC Funciton: RND transporter, outer membrane protein |
|||
|
cmeA
|
RND transporter, membrane fusion protein
|
||
|
cmeB
|
RND transporter, inner membrane protein
|
||
|
cmeC
|
RND transporter, outer membrane protein
|
||
|
Position: -65
Score: 6.3 Sequence: ACTTGAAGTTAACTTCAATT
Locus tag: Bcep18194_B1327
Name: PF07690 Funciton: Permease of the major facilitator superfamily
Locus tag: Bcep18194_B1328
Name: PF11811 Funciton: Protein of unknown function DUF3331 |
|||
|
PF07690
|
Permease of the major facilitator superfamily
|
||
|
PF11811
|
Protein of unknown function DUF3331
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |