Regulons of Bacteroides thetaiotaomicron VPI-5482

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraR	Arabinose	Arabinose utilization	4	5
TF	ArgR	Arginine	Arginine biosynthesis	1	1
TF	Crp			16	14
TF	FucR	Fucose	Fucose utilization	1	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	1	1
TF	GalR	Galactose	Galactose utilization	2	2
TF	HTCS_Aga-1	Arabinogalactan oligosaccharides	Arabinogalactan utilization	3	3
TF	HTCS_Ara-1	Arabinan	Arabinan utilization	2	2
TF	HTCS_Ara-2	Pectic galactan	Arabinan utilization	3	3
TF	HTCS_Fru	Fructose	Fructosides utilization; Fructose utilization	5	4
TF	HTCS_Hep	Heparin	Heparin utilization	3	3
TF	HTCS_Hya	Hyaluronan; Chondroitin sulphate	Hyaluronan utilization; Chondroitin sulphate utilization	3	2
TF	HTCS_Man-1	Alpha-mannans	Alpha-mannans utilization	2	2
TF	HTCS_Man-2	Alpha-mannans	Alpha-mannans utilization	1	1
TF	HTCS_Man-3	Alpha-mannans	Alpha-mannans utilization	5	4
TF	HTCS_Ogl-1	O-glycans	O-glycans utilization	1	1
TF	HTCS_Ogl-2	O-glycans	O-glycans utilization	2	2
TF	HTCS_Pga	Pectic galactan	Pectic galactan utilization	1	1
TF	HTCS_Rgu-1	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides	Rhamnogalacturonides utilization	5	5
TF	HTCS_Rgu-2		Rhamnogalacturonides utilization	10	8
TF	HcpR	Nitric oxide	Nitrosative stress response	2	1
TF	KdgR	2-keto-3-deoxygluconate	Glucuronate utilization; Galacturonate utilization	4	7
TF	LgoR	L-galactose	L-galactose utilization	3	3
TF	ManR	Mannose	Mannose utilization; Mannosides utilization	3	3
TF	NanR	N-acetylglucosamine; N-acetylneuraminic acid	Sialic acid utilization; N-acetylglucosamine utilization	8	4
TF	NrfR	Nitrite	Nitrate and nitrite respiration	2	1
TF	PerR	Hydrogen peroxide	Peroxide stress response; Oxidative stress response	7	3
TF	RhaR	Rhamnose	Rhamnose utilization	1	1
TF	SusR		Starch utilization	2	4
TF	SusR2		Starch utilization	1	2
TF	SusR3		Polysaccharides utilization	1	2
TF	SusR4		Polysaccharides utilization	2	2
TF	UxaR	Glucuronate; Galacturonate	Glucuronate utilization; Galacturonate utilization	2	2
TF	UxuR	Glucuronate	Glucuronate utilization	1	1
TF	XylR	Xylose	Xylose utilization	2	5
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	8	6
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	5	3

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Bacteroides thetaiotaomicron VPI-5482

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --