Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides thetaiotaomicron VPI-5482

Properties
Regulator type: Transcription factor
TF locus tag: BT4338
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 39
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -207
Score: 5.1
Sequence: TCTTATGTTTAACAACATACGT
Locus tag: BT1434
Name: uxuR
Funciton: Predicted transcriptional regulator for glucuronate catabolism, LacI family
Locus tag: BT1433
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: BT1432
Name: uxuA
Funciton: Mannonate dehydratase (EC 4.2.1.8)
BT1434
uxuR
Predicted transcriptional regulator for glucuronate catabolism, LacI family
BT1433
uxuB
D-mannonate oxidoreductase (EC 1.1.1.57)
BT1432
uxuA
Mannonate dehydratase (EC 4.2.1.8)
Position: -33
Score: 4.8
Sequence: TTTTGTGCTGTATAACACAGTT
Locus tag: BT4338
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
Locus tag: BT4337
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
BT4338
crp
transcriptional regulator, Crp/Fnr family
BT4337
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -168
Score: 5.7
Sequence: TTATATGTTATAGAATATAAAA
Locus tag: BT4080
Name: sbp_Crp-1
Funciton: Six-beta-propeller protein, cell surface exposed, putatively involved in polysaccharides binding
Locus tag: BT4081
Name: susC_Crp-1
Funciton: TonB-dependent outer membrane transporter of oligosaccharides
Locus tag: BT4082
Name: susD_Crp-1
Funciton: Outer membrane polysaccharide binding protein for oligosaccharides
Locus tag: BT4083
Name: null
Funciton: hypothetical protein
Locus tag: BT4084
Name: BT4084
Funciton: Glycosyl hydrolase family 43, five-bladed beta-propellor domain
BT4080
sbp_Crp-1
Six-beta-propeller protein, cell surface exposed, putatively involved in polysaccharides binding
BT4081
susC_Crp-1
TonB-dependent outer membrane transporter of oligosaccharides
BT4082
susD_Crp-1
Outer membrane polysaccharide binding protein for oligosaccharides
BT4083
hypothetical protein
BT4084
BT4084
Glycosyl hydrolase family 43, five-bladed beta-propellor domain
Position: -111
Score: 4.8
Sequence: GTATGTGTTTTACAACATACAG
Locus tag: BT2097
Name: COG3533
Funciton: Six-hairpin glycosidase-like, COG3533 family
BT2097
COG3533
Six-hairpin glycosidase-like, COG3533 family
Position: -77
Score: 4.8
Sequence: CTGTATGTTGTAAAACACATAC
Locus tag: BT2096
Name: BT1272
Funciton: Transcriptional regulator, GntR family
BT2096
BT1272
Transcriptional regulator, GntR family
Position: -135
Score: 5.4
Sequence: TTTTATGCTATAAAACATATCG
Locus tag: BT2178
Name: null
Funciton: hypothetical protein
BT2178
hypothetical protein
Position: -81
Score: 4.2
Sequence: AACAATGTTTTATAGCATGTCA
Locus tag: BT0791
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BT0792
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BT0793
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BT0794
Name: xylE
Funciton: D-xylose proton-symporter XylE
BT0791
xylR
Predicted regulator of xylose utilization, NrtR family
BT0792
xylB
Xylulose kinase (EC 2.7.1.17)
BT0793
xylA
Xylose isomerase (EC 5.3.1.5)
BT0794
xylE
D-xylose proton-symporter XylE
Position: -105
Score: 6.2
Sequence: TTTTATGTTGCACAACATATAA
Locus tag: BT0356
Name: araM
Funciton: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Locus tag: BT0355
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter
Locus tag: BT0354
Name: araR
Funciton: Predicted transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BT0353
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BT0352
Name: null
Funciton: hypothetical protein
Locus tag: BT0351
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BT0350
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
BT0356
araM
Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
BT0355
araP
Predicted sodium-dependent arabinose transporter
BT0354
araR
Predicted transcriptional regulator for arabinose utilization, NrtR family
BT0353
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BT0352
hypothetical protein
BT0351
araA
L-arabinose isomerase (EC 5.3.1.4)
BT0350
araB
Ribulokinase (EC 2.7.1.16)
Position: -271
Score: 5.7
Sequence: CATTATGTTCTATAACATAAAA
Locus tag: BT4330
Name: nupG
Funciton: Nucleoside permease NupG
BT4330
nupG
Nucleoside permease NupG
Position: -192
Score: 4.9
Sequence: ATATATGTTACACAAAAGATTT
Position: -69
Score: 5
Sequence: TTCCATGCTTTAAAACAGAATT
Locus tag: BT2831
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BT2832
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BT2833
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BT2834
Name: PF01432
Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BT2835
Name: secDF
Funciton: Preprotein translocase subunits SecD-SecF
BT2831
PF01694
Peptidase S54, rhomboid domain
BT2832
PF01694
Peptidase S54, rhomboid domain
BT2833
PF03372
Endonuclease/exonuclease/phosphatase
BT2834
PF01432
Peptidase M3A/M3B, thimet/oligopeptidase F
BT2835
secDF
Preprotein translocase subunits SecD-SecF
Position: -67
Score: 6.3
Sequence: TTTTATGTTATTTAGCATAAAA
Locus tag: BT0832
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BT0832
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: -100
Score: 5.5
Sequence: TTTCCTGCTATAGAACATATTA
Locus tag: BT1272
Name: fucR
Funciton: Transcriptional regulator of fucose utilization, GntR family
Locus tag: BT1273
Name: fucI
Funciton: L-fucose isomerase (EC 5.3.1.25)
Locus tag: BT1274
Name: fucA
Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: BT1275
Name: fucK
Funciton: L-fuculokinase (EC 2.7.1.51)
Locus tag: BT1276
Name: fucU
Funciton: Possible alternative L-fucose mutarotase
Locus tag: BT1277
Name: fucP
Funciton: L-fucose permease
BT1272
fucR
Transcriptional regulator of fucose utilization, GntR family
BT1273
fucI
L-fucose isomerase (EC 5.3.1.25)
BT1274
fucA
L-fuculose phosphate aldolase (EC 4.1.2.17)
BT1275
fucK
L-fuculokinase (EC 2.7.1.51)
BT1276
fucU
Possible alternative L-fucose mutarotase
BT1277
fucP
L-fucose permease
Position: -114
Score: 6.1
Sequence: TTTTATGTTGAAAAGCATAAAA
Locus tag: BT4738
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: BT4737
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
BT4738
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
BT4737
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
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