Regulon of HTCS_Ogl-2 in Bacteroides thetaiotaomicron VPI-5482
| Regulator type: | Transcription factor |
| TF locus tag: | BT4137 |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | O-glycans utilization |
| Effector: | O-glycans |
| Regulog: | HTCS_Ogl-2 - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - O-glycans
- By pathway - O-glycans utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -292
Score: 12.3 Sequence: ATTAGTGATTTTTGAAA-(4)-ATTAGTGATTTTTGAAA
Locus tag: BT4136
Name: fucO Funciton: Alpha-L-fucosidase 1 |
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fucO
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Alpha-L-fucosidase 1
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Position: -120
Score: 12.3 Sequence: ATTCATGCTTATTGAAA-(4)-AAGAATGAATTGTTAAC
Locus tag: BT4135
Name: susC_Ogl-3 Funciton: TonB-dependent outer membrane transporter of O-glycans oligomers
Locus tag: BT4134
Name: susD_Ogl-3 Funciton: Outer membrane polysaccharide binding protein for O-glycans oligomers
Locus tag: BT4133
Name: chiB Funciton: Putative chitobiase
Locus tag: BT4132
Name: chiC Funciton: Putative chitobiase |
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susC_Ogl-3
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TonB-dependent outer membrane transporter of O-glycans oligomers
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susD_Ogl-3
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Outer membrane polysaccharide binding protein for O-glycans oligomers
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chiB
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Putative chitobiase
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chiC
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Putative chitobiase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |