Regulog HTCS_Ogl-2 - Bacteroidaceae
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | O-glycans utilization |
| Effector: | O-glycans |
| Phylum: | Bacteroidetes |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - O-glycans
- By pathway - O-glycans utilization
| Genome | Genes | Operons |
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| Bacteroides cellulosilyticus DSM 14838 | ||
| Bacteroides coprophilus DSM 18228 | ||
| Bacteroides dorei DSM 17855 | ||
| Bacteroides eggerthii DSM 20697 | ||
| Bacteroides fragilis NCTC 9343 | ||
| Bacteroides ovatus ATCC 8483 | ||
| Bacteroides plebeius DSM 17135 | ||
| Bacteroides stercoris ATCC 43183 | ||
| Bacteroides thetaiotaomicron VPI-5482 | 5 | 2 |
| Bacteroides uniformis ATCC 8492 | ||
| Bacteroides vulgatus ATCC 8482 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| fucO |
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Bacteroides thetaiotaomicron VPI-5482 Site: position = -292 score = 12.3066 sequence = ATTAGTGATTTTTGAAA-(4)-ATTAGTGATTTTTGAAA Gene: BT4136: Alpha-L-fucosidase 1 |
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Alpha-L-fucosidase 1 |
| CRON 2. | ||||||||||||
| susC_Ogl-3 |
Gene: BACCELL_02601: TonB-dependent outer membrane transporter of O-glycans oligomers |
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Gene: BACOVA_02752: TonB-dependent outer membrane transporter of O-glycans oligomers |
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Bacteroides thetaiotaomicron VPI-5482 Site: position = -120 score = 12.3066 sequence = ATTCATGCTTATTGAAA-(4)-AAGAATGAATTGTTAAC Gene: BT4135: TonB-dependent outer membrane transporter of O-glycans oligomers |
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TonB-dependent outer membrane transporter of O-glycans oligomers |
| susD_Ogl-3 |
Gene: BACCELL_02602: Outer membrane polysaccharide binding protein for O-glycans oligomers |
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Gene: BACOVA_02751: Outer membrane polysaccharide binding protein for O-glycans oligomers |
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Gene: BT4134: Outer membrane polysaccharide binding protein for O-glycans oligomers |
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Outer membrane polysaccharide binding protein for O-glycans oligomers |
| chiB |
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Gene: BT4133: Putative chitobiase |
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Putative chitobiase |
| chiC |
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Gene: BT4132: Putative chitobiase |
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Putative chitobiase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |