Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HTCS_Rgu-2 in Bacteroides thetaiotaomicron VPI-5482

Properties
Regulator type: Transcription factor
TF locus tag: BT4182, BT4178
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Statistics of regulated genes:
- Genes 30
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 39 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -263
Score: 7.2
Sequence: GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA
Locus tag: BT4163
Name: BT4163
Funciton: Conserved hypothetical protein
Locus tag: BT4164
Name: susC_Rgu-3
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4165
Name: susC_Rgu-3
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4166
Name: BT4166
Funciton: Conserved hypothetical protein
Locus tag: BT4167
Name: BT4167
Funciton: Conserved hypothetical protein
Locus tag: BT4168
Name: susC_Rgu-4
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4169
Name: susD_Rgu-4
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4170
Name: pelL1
Funciton: Pectate lyase L (EC 4.2.2.2)
Locus tag: BT4171
Name: BT4171
Funciton: Hypothetical protein
BT4163
BT4163
Conserved hypothetical protein
BT4164
susC_Rgu-3
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
BT4165
susC_Rgu-3
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4166
BT4166
Conserved hypothetical protein
BT4167
BT4167
Conserved hypothetical protein
BT4168
susC_Rgu-4
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
BT4169
susD_Rgu-4
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4170
pelL1
Pectate lyase L (EC 4.2.2.2)
BT4171
BT4171
Hypothetical protein
Position: -183
Score: 6.5
Sequence: TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA
Locus tag: BT4175
Name: BT4175
Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BT4176
Name: rhiN3
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BT4177
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BT4178
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
BT4175
BT4175
Predicted beta-galactosidase, PL11 family
BT4176
rhiN3
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
BT4177
rhaU
L-rhamnose mutarotase
BT4178
HTCS_Rgu-2
Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Position: -123
Score: 9.6
Sequence: TGAACAAATATCCA-(6)-TGAATGATATTCTA
Locus tag: BT4172
Name: BT4172
Funciton: Conserved hypothetical protein
BT4172
BT4172
Conserved hypothetical protein
Position: -111
Score: 8.5
Sequence: GATACAATATTCTA-(6)-TGTACATCTTTCTA
Locus tag: BT4151
Name: bguA
Funciton: Beta-glucuronidase (EC 3.2.1.31)
Locus tag: BT4150
Name: rghT
Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
Locus tag: BT4149
Name: pehX3
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BT4148
Name: pehX3
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BT4147
Name: BT4147
Funciton: Conserved hypothetical protein
Locus tag: BT4146
Name: pehX2
Funciton: Predicted endopolygalacturonase
Locus tag: BT4145
Name: ramA
Funciton: Predicted alpha-L-rhamnosidase
BT4151
bguA
Beta-glucuronidase (EC 3.2.1.31)
BT4150
rghT
Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
BT4149
pehX3
Polygalacturonase (EC 3.2.1.15)
BT4148
pehX3
Polygalacturonase (EC 3.2.1.15)
BT4147
BT4147
Conserved hypothetical protein
BT4146
pehX2
Predicted endopolygalacturonase
BT4145
ramA
Predicted alpha-L-rhamnosidase
Position: -117
Score: 9.2
Sequence: TGGACAAATTTAAA-(6)-TGGACAATATTCCA
Locus tag: BT4174
Name: rhiN2
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BT4173
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
BT4174
rhiN2
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
BT4173
rhaH
Rhamnogalacturonyl hydrolase
Position: -253
Score: 8
Sequence: TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA
Locus tag: BT4182
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Locus tag: BT4181
Name: BT4181
Funciton: Beta-galactosidase, GH2 family
BT4182
HTCS_Rgu-2
Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
BT4181
BT4181
Beta-galactosidase, GH2 family
Position: -128
Score: 8.2
Sequence: TGTACGAAACTACA-(6)-TGATAATATCTCCA
Locus tag: BT4152
Name: abnC
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
Locus tag: BT4153
Name: pehX4
Funciton: Polygalacturonase (EC 3.2.1.15 )
Locus tag: BT4154
Name: BT4154
Funciton: Putative deacytylase
Locus tag: BT4155
Name: pehX5
Funciton: Polygalacturonase (EC 3.2.1.15)
BT4152
abnC
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
BT4153
pehX4
Polygalacturonase (EC 3.2.1.15 )
BT4154
BT4154
Putative deacytylase
BT4155
pehX5
Polygalacturonase (EC 3.2.1.15)
Position: -111
Score: 7.5
Sequence: GATTCATTTTTAAA-(6)-TGAACAAATCTCTA
Locus tag: BT2680
Name: BT2680
Funciton: Beta-galactosidase (EC 3.2.1.23)
BT2680
BT2680
Beta-galactosidase (EC 3.2.1.23)
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