Regulog HTCS_Rgu-2 - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By pathway - Rhamnogalacturonides utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855	28	8
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483	27	8
Bacteroides plebeius DSM 17135	12	6
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	30	8
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482	28	8

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ramA	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -88 score = 9.61917 sequence = TGAACAATATTCCA-(6)-TGAATAAAATTCCA Gene: BACDOR_00375: Alfa-L-rhamnosidase (EC 3.2.1.40)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -88 score = 9.61917 sequence = TGAACAATATTCCA-(6)-TGAATAAAATTCCA Gene: BVU_0174: Alfa-L-rhamnosidase (EC 3.2.1.40)	Alfa-L-rhamnosidase (EC 3.2.1.40)
BVU_0175	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00374: Predicted methylesterase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0175: Predicted methylesterase	Predicted methylesterase
rgaE2	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00373: Rhamnogalacturonan endolyase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0176: Rhamnogalacturonan endolyase	Rhamnogalacturonan endolyase
BVU_0177	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00372: Predicted alpha-L-rhamnosidase, GH28 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0177: Predicted alpha-L-rhamnosidase, GH28 family	Predicted alpha-L-rhamnosidase, GH28 family

CRON 2.
BT2680	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03334: Beta-galactosidase (EC 3.2.1.23)	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -87 score = 8.99174 sequence = TGAACGAATTTCTA-(6)-TGTATCTTATTCTA Gene: BACDOR_00393: Beta-galactosidase (EC 3.2.1.23)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_00248: Beta-galactosidase (EC 3.2.1.23)	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -111 score = 7.47019 sequence = GATTCATTTTTAAA-(6)-TGAACAAATCTCTA Gene: BT2680: Beta-galactosidase (EC 3.2.1.23)	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -87 score = 8.99174 sequence = TGAACGAATTTCTA-(6)-TGTATCTTATTCTA Gene: BVU_0162: Beta-galactosidase (EC 3.2.1.23)	Beta-galactosidase (EC 3.2.1.23)
BVU_0161	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00394: Predicted beta-galactosidase, PL11 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0161: Predicted beta-galactosidase, PL11 family	Predicted beta-galactosidase, PL11 family

CRON 3.
bguA	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -94 score = 9.29039 sequence = TATACGAATTTCCA-(6)-TGTACTTCTTTCTA Gene: BACDOR_00368: Beta-glucuronidase (EC 3.2.1.31)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -141 score = 8.19596 sequence = TGGACAATATTTCA-(6)-TGTAGTTTTGTACA Site: position = -83 score = 8.54903 sequence = GATACAATATTCTA-(6)-TGTACATCTTTCTA Gene: BACOVA_04950: Beta-glucuronidase (EC 3.2.1.31)	* Bacteroides plebeius DSM 17135 Site: position = -96 score = 8.51916 sequence = TACACAATATTCCA-(6)-TGAAGAATTATCGA Gene: BACPLE_00503: Beta-glucuronidase (EC 3.2.1.31)	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -111 score = 8.54903 sequence = GATACAATATTCTA-(6)-TGTACATCTTTCTA Gene: BT4151: Beta-glucuronidase (EC 3.2.1.31)	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -94 score = 9.29039 sequence = TATACGAATTTCCA-(6)-TGTACTTCTTTCTA Gene: BVU_0181: Beta-glucuronidase (EC 3.2.1.31)	Beta-glucuronidase (EC 3.2.1.31)
rghT	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00367: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04949: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4150: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0182: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)	Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
pehX3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00366: Polygalacturonase (EC 3.2.1.15)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	2 Bacteroides ovatus ATCC 8483 Gene: BACOVA_04948: Polygalacturonase (EC 3.2.1.15) Gene: BACOVA_04997: Polygalacturonase (EC 3.2.1.15)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482 Gene: BT4148: Polygalacturonase (EC 3.2.1.15) Gene: BT4149: Polygalacturonase (EC 3.2.1.15)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0183: Polygalacturonase (EC 3.2.1.15)	Polygalacturonase (EC 3.2.1.15)
BT4147	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00365: Conserved hypothetical protein	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04947: Conserved hypothetical protein	* Bacteroides plebeius DSM 17135 Site: position = -96 score = 8.58625 sequence = TGTATGATAATCGA-(6)-TGTATAATAATCCA Gene: BACPLE_00253: Conserved hypothetical protein	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4147: Conserved hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0184: Conserved hypothetical protein	Conserved hypothetical protein
BVU_0185	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00364: Conserved hypothetical protein	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0185: Conserved hypothetical protein	Conserved hypothetical protein
pehX2	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00363: Predicted endopolygalacturonase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04946: Predicted endopolygalacturonase	Bacteroides plebeius DSM 17135 Gene: BACPLE_00254: Predicted endopolygalacturonase	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4146: Predicted endopolygalacturonase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0186: Predicted endopolygalacturonase	Predicted endopolygalacturonase
ramA	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01179: Predicted alpha-L-rhamnosidase	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00362: Predicted alpha-L-rhamnosidase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04945: Predicted alpha-L-rhamnosidase	* Bacteroides plebeius DSM 17135 Site: position = -136 score = 8.04414 sequence = CGTACAAAAATCCA-(6)-TGTACATTCCTATA Gene: BACPLE_03595: Predicted alpha-L-rhamnosidase	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00370: Predicted alpha-L-rhamnosidase	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4145: Predicted alpha-L-rhamnosidase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0187: Predicted alpha-L-rhamnosidase	Predicted alpha-L-rhamnosidase
BT2958	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -85 score = 9.26695 sequence = TGGACGAATTTCCA-(6)-TGTATCTTATTCTA Gene: BACDOR_00405: Putative glycosil hydrolase, GH115 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -79 score = 8.70464 sequence = TGAACGAAATTCTA-(6)-TGTACATGATTCTA Gene: BACOVA_02777: Putative glycosil hydrolase, GH115 family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2958: Putative glycosil hydrolase, GH115 family	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -85 score = 9.26695 sequence = TGGACGAATTTCCA-(6)-TGTATCTTATTCTA Gene: BVU_0154: Putative glycosil hydrolase, GH115 family	Putative glycosil hydrolase, GH115 family
pehX5	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_00873: Polygalacturonase (EC 3.2.1.15)	Bacteroides coprophilus DSM 18228	2 Bacteroides dorei DSM 17855 Gene: BACDOR_00406: Polygalacturonase (EC 3.2.1.15) Gene: BACDOR_04630: Polygalacturonase (EC 3.2.1.15)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04954: Polygalacturonase (EC 3.2.1.15)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4155: Polygalacturonase (EC 3.2.1.15)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0153: Polygalacturonase (EC 3.2.1.15)	Polygalacturonase (EC 3.2.1.15)
BT4175	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03333: Predicted beta-galactosidase, PL11 family	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00407: Predicted beta-galactosidase, PL11 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -93 score = 8.33037 sequence = TGATGATTTCTACA-(6)-TGTACAATATTCTA Gene: BACOVA_04974: Predicted beta-galactosidase, PL11 family	Bacteroides plebeius DSM 17135 Gene: BACPLE_00255: Predicted beta-galactosidase, PL11 family	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -183 score = 6.48899 sequence = TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA Gene: BT4175: Predicted beta-galactosidase, PL11 family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0152: Predicted beta-galactosidase, PL11 family	Predicted beta-galactosidase, PL11 family
rhiN3	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03332: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00408: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04975: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides plebeius DSM 17135 Gene: BACPLE_00256: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4176: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0151: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhaU	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03331: L-rhamnose mutarotase	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00409: L-rhamnose mutarotase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04976: L-rhamnose mutarotase	Bacteroides plebeius DSM 17135 Gene: BACPLE_03131: L-rhamnose mutarotase	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4177: L-rhamnose mutarotase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0150: L-rhamnose mutarotase	L-rhamnose mutarotase
HTCS_Rgu-2	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00410: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	3 Bacteroides ovatus ATCC 8483 Gene: BACOVA_04977: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family Gene: BACOVA_04993: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family Gene: BACOVA_05030: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family	Bacteroides plebeius DSM 17135 Gene: BACPLE_03129: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482* Gene: BT4178: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family Site: position = -253 score = 7.96651 sequence = TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA Gene: BT4182: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0149: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family	Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
rhaH	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_00088: Rhamnogalacturonyl hydrolase	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -108 score = 8.85777 sequence = TGAACGAATAAACA-(6)-TGAATGAATTTCTA Gene: BACDOR_00395: Rhamnogalacturonyl hydrolase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04972: Rhamnogalacturonyl hydrolase	* Bacteroides plebeius DSM 17135 Site: position = -93 score = 8.93297 sequence = TGTACAAAAGCACA-(6)-TGTACGATATTCCA Gene: BACPLE_03132: Rhamnogalacturonyl hydrolase	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4173: Rhamnogalacturonyl hydrolase	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -108 score = 8.85777 sequence = TGAACGAATAAACA-(6)-TGAATGAATTTCTA Gene: BVU_0160: Rhamnogalacturonyl hydrolase	Rhamnogalacturonyl hydrolase
BACPLE_03130	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_03130: Hypothetical protein	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein
BVU_0180	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00369: Predicted arabinosidase, GH42 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -108 score = 8.73658 sequence = TGTACAAAACTACA-(6)-TGAAATATTGTCCA Gene: BACOVA_04951: Predicted arabinosidase, GH42 family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0180: Predicted arabinosidase, GH42 family	Predicted arabinosidase, GH42 family
abnC	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03341: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00370: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04952: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Bacteroides plebeius DSM 17135 Gene: BACPLE_00252: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -128 score = 8.19823 sequence = TGTACGAAACTACA-(6)-TGATAATATCTCCA Gene: BT4152: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0179: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
BACOVA_04953	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04953: Hypothetical protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein
pehX4	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_03743: Polygalacturonase (EC 3.2.1.15 )	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_03324: Polygalacturonase (EC 3.2.1.15 )	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_05002: Polygalacturonase (EC 3.2.1.15 )	* Bacteroides plebeius DSM 17135 Site: position = -150 score = 8.68569 sequence = TGTACAAAAAGACA-(6)-TGCATGATTCTCTA Gene: BACPLE_03588: Polygalacturonase (EC 3.2.1.15 )	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00201: Polygalacturonase (EC 3.2.1.15 )	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4153: Polygalacturonase (EC 3.2.1.15 )	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1767: Polygalacturonase (EC 3.2.1.15 )	Polygalacturonase (EC 3.2.1.15 )
BT4154	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00389: Putative deacytylase	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4154: Putative deacytylase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Putative deacytylase
BT4156	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -69 score = 9.16267 sequence = TGTATCATTTTTCA-(6)-TGTATGATTTTCCA Gene: BACDOR_03323: Beta-galactosidase, GH2 family	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_03593: Beta-galactosidase, GH2 family	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4156: Beta-galactosidase, GH2 family	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -69 score = 9.16267 sequence = TGTATCATTTTTCA-(6)-TGTATGATTTTCCA Gene: BVU_1768: Beta-galactosidase, GH2 family	Beta-galactosidase, GH2 family
BT4172	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_00396: Conserved hypothetical protein	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -89 score = 8.72866 sequence = TGAACGAATCGCCA-(6)-TGGATAATATTCTA Gene: BACOVA_04967: Conserved hypothetical protein	* Bacteroides plebeius DSM 17135 Site: position = -92 score = 9.73141 sequence = TATACAAATTTACA-(6)-TGTACAATACTCCA Gene: BACPLE_00251: Conserved hypothetical protein	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -123 score = 9.63801 sequence = TGAACAAATATCCA-(6)-TGAATGATATTCTA Gene: BT4172: Conserved hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_0159: Conserved hypothetical protein	Conserved hypothetical protein
BACOVA_05029	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -113 score = 7.04886 sequence = TGGAAAAAATGACA-(6)-TGGATAATAATCCT Gene: BACOVA_05029: Hypothetical protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein
rhiN2	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -91 score = 8.74526 sequence = TGCATAATATTCAA-(6)-TGTACACATTTCCA Gene: BACDOR_00371: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -115 score = 8.43768 sequence = TGAACGAATTTAAA-(6)-TGCACGGAAATCCA Gene: BACOVA_04973: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -117 score = 9.20123 sequence = TGGACAAATTTAAA-(6)-TGGACAATATTCCA Gene: BT4174: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -94 score = 8.74526 sequence = TGCATAATATTCAA-(6)-TGTACACATTTCCA Gene: BVU_0178: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
BT4181	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_04992: Beta-galactosidase, GH2 family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4181: Beta-galactosidase, GH2 family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Beta-galactosidase, GH2 family

CRON 4.
susC_Ara-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -118 score = 7.70349 sequence = TAGAGTATTCAACA-(6)-TGTACAATAATCCA Gene: BACDOR_01719: TonB-dependent outer membrane transporter of arabinan oligosaccharides	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01540: TonB-dependent outer membrane transporter of arabinan oligosaccharides	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_00643: TonB-dependent outer membrane transporter of arabinan oligosaccharides	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -91 score = 7.70349 sequence = TAGAGTATTCAACA-(6)-TGTACAATAATCCA Gene: BVU_1005: TonB-dependent outer membrane transporter of arabinan oligosaccharides	TonB-dependent outer membrane transporter of arabinan oligosaccharides
susD_Ara-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_01720: Outer membrane polysaccharide binding protein for arabinan oligosaccharides	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01539: Outer membrane polysaccharide binding protein for arabinan oligosaccharides	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_00644: Outer membrane polysaccharide binding protein for arabinan oligosaccharides	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1006: Outer membrane polysaccharide binding protein for arabinan oligosaccharides	Outer membrane polysaccharide binding protein for arabinan oligosaccharides
BVU_1007	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_01721: Conserved hypothetical protein	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01538: Conserved hypothetical protein	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_00645: Conserved hypothetical protein	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1007: Conserved hypothetical protein	Conserved hypothetical protein
BVU_1008	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_01722: Putative endo-arabinanase	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01537: Putative endo-arabinanase	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135 Gene: BACPLE_00646: Putative endo-arabinanase	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1008: Putative endo-arabinanase	Putative endo-arabinanase

CRON 5.
BT4163	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -235 score = 7.16697 sequence = TGAATCAGAATACA-(6)-TGTACAGTAATTAA Gene: BACOVA_02709: Conserved hypothetical protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -263 score = 7.15491 sequence = GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA Gene: BT4163: Conserved hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Conserved hypothetical protein
susC_Rgu-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02708: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4164: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
susC_Rgu-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02707: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4165: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4166	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02706: Conserved hypothetical protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4166: Conserved hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Conserved hypothetical protein
BT4167	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02705: Conserved hypothetical protein	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4167: Conserved hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Conserved hypothetical protein
susC_Rgu-4	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02704: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4168: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
susD_Rgu-4	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_02703: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4169: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
pelL1	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4170: Pectate lyase L (EC 4.2.2.2)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Pectate lyase L (EC 4.2.2.2)
BT4171	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT4171: Hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog HTCS_Rgu-2 - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --