Regulon of HTCS_Rgu-2 in Bacteroides plebeius DSM 17135

Properties
Regulator type:	Transcription factor
TF locus tag:	BACPLE_03129
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Regulog:	HTCS_Rgu-2 - Bacteroidaceae
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -136 Score: 8 Sequence: CGTACAAAAATCCA-(6)-TGTACATTCCTATA Locus tag: BACPLE_03595 Name: ramA Funciton: Predicted alpha-L-rhamnosidase
	BACPLE_03595	ramA	Predicted alpha-L-rhamnosidase
Position: -150 Score: 8.7 Sequence: TGTACAAAAAGACA-(6)-TGCATGATTCTCTA Locus tag: BACPLE_03588 Name: pehX4 Funciton: Polygalacturonase (EC 3.2.1.15 )
	BACPLE_03588	pehX4	Polygalacturonase (EC 3.2.1.15 )
Position: -96 Score: 8.6 Sequence: TGTATGATAATCGA-(6)-TGTATAATAATCCA Locus tag: BACPLE_00253 Name: BT4147 Funciton: Conserved hypothetical protein Locus tag: BACPLE_00254 Name: pehX2 Funciton: Predicted endopolygalacturonase Locus tag: BACPLE_00255 Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family Locus tag: BACPLE_00256 Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BACPLE_00253	BT4147	Conserved hypothetical protein
	BACPLE_00254	pehX2	Predicted endopolygalacturonase
	BACPLE_00255	BT4175	Predicted beta-galactosidase, PL11 family
	BACPLE_00256	rhiN3	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Position: -92 Score: 9.7 Sequence: TATACAAATTTACA-(6)-TGTACAATACTCCA Locus tag: BACPLE_00251 Name: BT4172 Funciton: Conserved hypothetical protein
	BACPLE_00251	BT4172	Conserved hypothetical protein
Position: -96 Score: 8.5 Sequence: TACACAATATTCCA-(6)-TGAAGAATTATCGA Locus tag: BACPLE_00503 Name: bguA Funciton: Beta-glucuronidase (EC 3.2.1.31)
	BACPLE_00503	bguA	Beta-glucuronidase (EC 3.2.1.31)
Position: -93 Score: 8.9 Sequence: TGTACAAAAGCACA-(6)-TGTACGATATTCCA Locus tag: BACPLE_03132 Name: rhaH Funciton: Rhamnogalacturonyl hydrolase Locus tag: BACPLE_03131 Name: rhaU Funciton: L-rhamnose mutarotase Locus tag: BACPLE_03130 Name: BACPLE_03130 Funciton: Hypothetical protein Locus tag: BACPLE_03129 Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
	BACPLE_03132	rhaH	Rhamnogalacturonyl hydrolase
	BACPLE_03131	rhaU	L-rhamnose mutarotase
	BACPLE_03130	BACPLE_03130	Hypothetical protein
	BACPLE_03129	HTCS_Rgu-2	Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD