Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rgaE2 gene

Properties
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides dorei DSM 17855
Position: -88
Score: 9.61917
Sequence: TGAACAATATTCCA-(6)-TGAATAAAATTCCA
Locus tag: BACDOR_00375
Name: ramA
Funciton: Alfa-L-rhamnosidase (EC 3.2.1.40)
Locus tag: BACDOR_00374
Name: BVU_0175
Funciton: Predicted methylesterase
Locus tag: BACDOR_00373
Name: rgaE2
Funciton: Rhamnogalacturonan endolyase
Locus tag: BACDOR_00372
Name: BVU_0177
Funciton: Predicted alpha-L-rhamnosidase, GH28 family
ramA-BVU_0175-rgaE2-BVU_0177 -88 9.6 TGAACAATATTCCA-(6)-TGAATAAAATTCCA BACDOR_00375
Bacteroides vulgatus ATCC 8482
Position: -88
Score: 9.61917
Sequence: TGAACAATATTCCA-(6)-TGAATAAAATTCCA
Locus tag: BVU_0174
Name: ramA
Funciton: Alfa-L-rhamnosidase (EC 3.2.1.40)
Locus tag: BVU_0175
Name: BVU_0175
Funciton: Predicted methylesterase
Locus tag: BVU_0176
Name: rgaE2
Funciton: Rhamnogalacturonan endolyase
Locus tag: BVU_0177
Name: BVU_0177
Funciton: Predicted alpha-L-rhamnosidase, GH28 family
ramA-BVU_0175-rgaE2-BVU_0177 -88 9.6 TGAACAATATTCCA-(6)-TGAATAAAATTCCA BVU_0174