Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing susD_Rgu-4 gene

Properties
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides ovatus ATCC 8483
Position: -235
Score: 7.16697
Sequence: TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Locus tag: BACOVA_02709
Name: BT4163
Funciton: Conserved hypothetical protein
Locus tag: BACOVA_02708
Name: susC_Rgu-3
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACOVA_02707
Name: susC_Rgu-3
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BACOVA_02706
Name: BT4166
Funciton: Conserved hypothetical protein
Locus tag: BACOVA_02705
Name: BT4167
Funciton: Conserved hypothetical protein
Locus tag: BACOVA_02704
Name: susC_Rgu-4
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACOVA_02703
Name: susD_Rgu-4
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4163-susC_Rgu-3-susC_Rgu-3-BT4166-BT4167-susC_Rgu-4-susD_Rgu-4 -235 7.2 TGAATCAGAATACA-(6)-TGTACAGTAATTAA BACOVA_02709
Bacteroides thetaiotaomicron VPI-5482
Position: -263
Score: 7.15491
Sequence: GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA
Locus tag: BT4163
Name: BT4163
Funciton: Conserved hypothetical protein
Locus tag: BT4164
Name: susC_Rgu-3
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4165
Name: susC_Rgu-3
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4166
Name: BT4166
Funciton: Conserved hypothetical protein
Locus tag: BT4167
Name: BT4167
Funciton: Conserved hypothetical protein
Locus tag: BT4168
Name: susC_Rgu-4
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4169
Name: susD_Rgu-4
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4170
Name: pelL1
Funciton: Pectate lyase L (EC 4.2.2.2)
Locus tag: BT4171
Name: BT4171
Funciton: Hypothetical protein
BT4163-susC_Rgu-3-susC_Rgu-3-BT4166-BT4167-susC_Rgu-4-susD_Rgu-4-pelL1-BT4171 -263 7.2 GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA BT4163