Regulon of HTCS_Rgu-2 in Bacteroides ovatus ATCC 8483

Properties
Regulator type:	Transcription factor
TF locus tag:	BACOVA_04993, BACOVA_04977, BACOVA_05030
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Regulog:	HTCS_Rgu-2 - Bacteroidaceae
Statistics of regulated genes:
- Genes	27
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -79 Score: 8.7 Sequence: TGAACGAAATTCTA-(6)-TGTACATGATTCTA Locus tag: BACOVA_02777 Name: BT2958 Funciton: Putative glycosil hydrolase, GH115 family
	BACOVA_02777	BT2958	Putative glycosil hydrolase, GH115 family
Position: -235 Score: 7.2 Sequence: TGAATCAGAATACA-(6)-TGTACAGTAATTAA Locus tag: BACOVA_02709 Name: BT4163 Funciton: Conserved hypothetical protein Locus tag: BACOVA_02708 Name: susC_Rgu-3 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACOVA_02707 Name: susC_Rgu-3 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides Locus tag: BACOVA_02706 Name: BT4166 Funciton: Conserved hypothetical protein Locus tag: BACOVA_02705 Name: BT4167 Funciton: Conserved hypothetical protein Locus tag: BACOVA_02704 Name: susC_Rgu-4 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACOVA_02703 Name: susD_Rgu-4 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
	BACOVA_02709	BT4163	Conserved hypothetical protein
	BACOVA_02708	susC_Rgu-3	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
	BACOVA_02707	susC_Rgu-3	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
	BACOVA_02706	BT4166	Conserved hypothetical protein
	BACOVA_02705	BT4167	Conserved hypothetical protein
	BACOVA_02704	susC_Rgu-4	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
	BACOVA_02703	susD_Rgu-4	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Position: -93 Score: 8.3 Sequence: TGATGATTTCTACA-(6)-TGTACAATATTCTA Locus tag: BACOVA_04974 Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family Locus tag: BACOVA_04975 Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BACOVA_04976 Name: rhaU Funciton: L-rhamnose mutarotase Locus tag: BACOVA_04977 Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
	BACOVA_04974	BT4175	Predicted beta-galactosidase, PL11 family
	BACOVA_04975	rhiN3	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BACOVA_04976	rhaU	L-rhamnose mutarotase
	BACOVA_04977	HTCS_Rgu-2	Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Position: -89 Score: 8.7 Sequence: TGAACGAATCGCCA-(6)-TGGATAATATTCTA Locus tag: BACOVA_04967 Name: BT4172 Funciton: Conserved hypothetical protein
	BACOVA_04967	BT4172	Conserved hypothetical protein
Position: -108 Score: 8.7 Sequence: TGTACAAAACTACA-(6)-TGAAATATTGTCCA Locus tag: BACOVA_04951 Name: BVU_0180 Funciton: Predicted arabinosidase, GH42 family Locus tag: BACOVA_04952 Name: abnC Funciton: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) Locus tag: BACOVA_04953 Name: BACOVA_04953 Funciton: Hypothetical protein Locus tag: BACOVA_04954 Name: pehX5 Funciton: Polygalacturonase (EC 3.2.1.15)
	BACOVA_04951	BVU_0180	Predicted arabinosidase, GH42 family
	BACOVA_04952	abnC	Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
	BACOVA_04953	BACOVA_04953	Hypothetical protein
	BACOVA_04954	pehX5	Polygalacturonase (EC 3.2.1.15)
Position: -113 Score: 7 Sequence: TGGAAAAAATGACA-(6)-TGGATAATAATCCT Locus tag: BACOVA_05029 Name: BACOVA_05029 Funciton: Hypothetical protein Locus tag: BACOVA_05030 Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
	BACOVA_05029	BACOVA_05029	Hypothetical protein
	BACOVA_05030	HTCS_Rgu-2	Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Position: -115 Score: 8.4 Sequence: TGAACGAATTTAAA-(6)-TGCACGGAAATCCA Locus tag: BACOVA_04973 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BACOVA_04972 Name: rhaH Funciton: Rhamnogalacturonyl hydrolase
	BACOVA_04973	rhiN2	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BACOVA_04972	rhaH	Rhamnogalacturonyl hydrolase
Position: -141 Score: 8.2 Sequence: TGGACAATATTTCA-(6)-TGTAGTTTTGTACA Position: -83 Score: 8.5 Sequence: GATACAATATTCTA-(6)-TGTACATCTTTCTA Locus tag: BACOVA_04950 Name: bguA Funciton: Beta-glucuronidase (EC 3.2.1.31) Locus tag: BACOVA_04949 Name: rghT Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86) Locus tag: BACOVA_04948 Name: pehX3 Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: BACOVA_04947 Name: BT4147 Funciton: Conserved hypothetical protein Locus tag: BACOVA_04946 Name: pehX2 Funciton: Predicted endopolygalacturonase Locus tag: BACOVA_04945 Name: ramA Funciton: Predicted alpha-L-rhamnosidase
	BACOVA_04950	bguA	Beta-glucuronidase (EC 3.2.1.31)
	BACOVA_04949	rghT	Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
	BACOVA_04948	pehX3	Polygalacturonase (EC 3.2.1.15)
	BACOVA_04947	BT4147	Conserved hypothetical protein
	BACOVA_04946	pehX2	Predicted endopolygalacturonase
	BACOVA_04945	ramA	Predicted alpha-L-rhamnosidase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of HTCS_Rgu-2 in Bacteroides ovatus ATCC 8483

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --