Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing HTCS_Rgu-2 gene

Properties
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides dorei DSM 17855
Position: -85
Score: 9.26695
Sequence: TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Locus tag: BACDOR_00405
Name: BT2958
Funciton: Putative glycosil hydrolase, GH115 family
Locus tag: BACDOR_00406
Name: pehX5
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BACDOR_00407
Name: BT4175
Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BACDOR_00408
Name: rhiN3
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BACDOR_00409
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BACDOR_00410
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
BT2958-pehX5-BT4175-rhiN3-rhaU-HTCS_Rgu-2 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA BACDOR_00405
Bacteroides ovatus ATCC 8483
Position: -93
Score: 8.33037
Sequence: TGATGATTTCTACA-(6)-TGTACAATATTCTA
Locus tag: BACOVA_04974
Name: BT4175
Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BACOVA_04975
Name: rhiN3
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BACOVA_04976
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BACOVA_04977
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
BT4175-rhiN3-rhaU-HTCS_Rgu-2 -93 8.3 TGATGATTTCTACA-(6)-TGTACAATATTCTA BACOVA_04974
Bacteroides plebeius DSM 17135
Position: -93
Score: 8.93297
Sequence: TGTACAAAAGCACA-(6)-TGTACGATATTCCA
Locus tag: BACPLE_03132
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
Locus tag: BACPLE_03131
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BACPLE_03130
Name: BACPLE_03130
Funciton: Hypothetical protein
Locus tag: BACPLE_03129
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
rhaH-rhaU-BACPLE_03130-HTCS_Rgu-2 -93 8.9 TGTACAAAAGCACA-(6)-TGTACGATATTCCA BACPLE_03132
Bacteroides thetaiotaomicron VPI-5482
Position: -253
Score: 7.96651
Sequence: TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA
Locus tag: BT4182
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Locus tag: BT4181
Name: BT4181
Funciton: Beta-galactosidase, GH2 family
HTCS_Rgu-2-BT4181 -253 8 TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA BT4182
Bacteroides vulgatus ATCC 8482
Position: -85
Score: 9.26695
Sequence: TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Locus tag: BVU_0154
Name: BT2958
Funciton: Putative glycosil hydrolase, GH115 family
Locus tag: BVU_0153
Name: pehX5
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BVU_0152
Name: BT4175
Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BVU_0151
Name: rhiN3
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BVU_0150
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BVU_0149
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
BT2958-pehX5-BT4175-rhiN3-rhaU-HTCS_Rgu-2 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA BVU_0154