Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaH gene

Properties
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides dorei DSM 17855
Position: -108
Score: 8.85777
Sequence: TGAACGAATAAACA-(6)-TGAATGAATTTCTA
Locus tag: BACDOR_00395
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
Locus tag: BACDOR_00396
Name: BT4172
Funciton: Conserved hypothetical protein
rhaH-BT4172 -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA BACDOR_00395
Bacteroides ovatus ATCC 8483
Position: -115
Score: 8.43768
Sequence: TGAACGAATTTAAA-(6)-TGCACGGAAATCCA
Locus tag: BACOVA_04973
Name: rhiN2
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BACOVA_04972
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
rhiN2-rhaH -115 8.4 TGAACGAATTTAAA-(6)-TGCACGGAAATCCA BACOVA_04973
Bacteroides plebeius DSM 17135
Position: -93
Score: 8.93297
Sequence: TGTACAAAAGCACA-(6)-TGTACGATATTCCA
Locus tag: BACPLE_03132
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
Locus tag: BACPLE_03131
Name: rhaU
Funciton: L-rhamnose mutarotase
Locus tag: BACPLE_03130
Name: BACPLE_03130
Funciton: Hypothetical protein
Locus tag: BACPLE_03129
Name: HTCS_Rgu-2
Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
rhaH-rhaU-BACPLE_03130-HTCS_Rgu-2 -93 8.9 TGTACAAAAGCACA-(6)-TGTACGATATTCCA BACPLE_03132
Bacteroides thetaiotaomicron VPI-5482
Position: -117
Score: 9.20123
Sequence: TGGACAAATTTAAA-(6)-TGGACAATATTCCA
Locus tag: BT4174
Name: rhiN2
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BT4173
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
rhiN2-rhaH -117 9.2 TGGACAAATTTAAA-(6)-TGGACAATATTCCA BT4174
Bacteroides vulgatus ATCC 8482
Position: -108
Score: 8.85777
Sequence: TGAACGAATAAACA-(6)-TGAATGAATTTCTA
Locus tag: BVU_0160
Name: rhaH
Funciton: Rhamnogalacturonyl hydrolase
Locus tag: BVU_0159
Name: BT4172
Funciton: Conserved hypothetical protein
rhaH-BT4172 -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA BVU_0160