Regulon of HTCS_Hep in Bacteroides thetaiotaomicron VPI-5482
| Regulator type: | Transcription factor |
| TF locus tag: | BT4663 |
| Regulator family: | [Other] |
| Regulation mode: | activator (repressor) |
| Biological process: | Heparin utilization |
| Effector: | Heparin |
| Regulog: | HTCS_Hep - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Heparin
- By pathway - Heparin utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -149
Score: 8.5 Sequence: ACAAAAACAA-(11)-ACAAATTTGA
Locus tag: BT4662
Name: hepL1 Funciton: Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
Locus tag: BT4661
Name: BT4661 Funciton: Hypothetical protein, presumably involved in heparin utilization
Locus tag: BT4660
Name: susC_Hep-1 Funciton: TonB-dependent outer membrane transporter of heparin oligosaccharides
Locus tag: BT4659
Name: susD_Hep Funciton: Outer membrane polysaccharide binding protein for heparin oligosaccharides |
|||
|
hepL1
|
Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
|
||
|
BT4661
|
Hypothetical protein, presumably involved in heparin utilization
|
||
|
susC_Hep-1
|
TonB-dependent outer membrane transporter of heparin oligosaccharides
|
||
|
susD_Hep
|
Outer membrane polysaccharide binding protein for heparin oligosaccharides
|
||
|
Position: -140
Score: 8 Sequence: AGAATATTAA-(11)-ACAAATTCAA
Locus tag: BT4658
Name: hepH Funciton: Glucuronyl hydrolase ( 3.2.1.-)
Locus tag: BT4657
Name: hepL2 Funciton: Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
Locus tag: BT4656
Name: nagS Funciton: N-acetylglucosamine-6-sulfatase (EC 3.1.6.14)
Locus tag: BT4655
Name: nagX Funciton: Conserved hypothetical protein
Locus tag: BT4654
Name: nagK Funciton: N-acetylglucosamine kinase (EC 2.7.1.59)
Locus tag: BT4653
Name: nagP Funciton: N-acetylglucosamine transporter
Locus tag: BT4652
Name: hepE Funciton: Predicted heparin lyase |
|||
|
hepH
|
Glucuronyl hydrolase ( 3.2.1.-)
|
||
|
hepL2
|
Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
|
||
|
nagS
|
N-acetylglucosamine-6-sulfatase (EC 3.1.6.14)
|
||
|
nagX
|
Conserved hypothetical protein
|
||
|
nagK
|
N-acetylglucosamine kinase (EC 2.7.1.59)
|
||
|
nagP
|
N-acetylglucosamine transporter
|
||
|
hepE
|
Predicted heparin lyase
|
||
|
Position: -140
Score: 8.3 Sequence: ACAAATGTGA-(11)-ACAAACGAAA
Locus tag: BT4675
Name: hepC Funciton: Heparin lyase I / Heparinase I (EC 4.2.2.7) |
|||
|
hepC
|
Heparin lyase I / Heparinase I (EC 4.2.2.7)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |