Regulon of NanR in Bacteroides thetaiotaomicron VPI-5482
| Regulator type: | Transcription factor |
| TF locus tag: | BT0433 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Regulog: | NanR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - ROK
- By effector - N-acetylglucosamine
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 5.8 Sequence: TTAATAAAAAAATTAATTATCTT
Locus tag: BT0433
Name: nanR Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
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nanR
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Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
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Position: -98
Score: 6.3 Sequence: TTATTAATAAAATATTTTATTAT
Position: -95
Score: 5.9 Sequence: TTAATAAAATATTTTATTATCTA
Locus tag: BT0434
Name: BT0434 Funciton: NTP pyrophosphohydrolases including oxidative damage repair enzymes
Locus tag: BT0435
Name: SSF51445 Funciton: Glycoside hydrolase, superfamily SSF51445
Locus tag: BT0436
Name: nanJ Funciton: Predicted sialic acid transporter, AraJ-MFS family
Locus tag: BT0437
Name: nanE-II Funciton: N-acylglucosamine 2-epimerase (EC 5.1.3.8)
Locus tag: BT0438
Name: agaN Funciton: Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
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BT0434
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NTP pyrophosphohydrolases including oxidative damage repair enzymes
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SSF51445
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Glycoside hydrolase, superfamily SSF51445
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nanJ
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Predicted sialic acid transporter, AraJ-MFS family
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nanE-II
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N-acylglucosamine 2-epimerase (EC 5.1.3.8)
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agaN
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Alpha-N-acetylglucosaminidase (EC 3.2.1.50)
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Position: -39
Score: 4.8 Sequence: ATAATAATCAATTAATTAATCTT
Locus tag: BT2055
Name: exbB Funciton: Outer membrane transport system, transport protein ExbB
Locus tag: BT2054
Name: null Funciton: hypothetical protein
Locus tag: BT2053
Name: exbD Funciton: Outer membrane transport system, transport protein ExbD
Locus tag: BT2052
Name: exbD2 Funciton: Outer membrane transport system, transport protein ExbD |
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exbB
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Outer membrane transport system, transport protein ExbB
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hypothetical protein
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exbD
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Outer membrane transport system, transport protein ExbD
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exbD2
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Outer membrane transport system, transport protein ExbD
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |