Regulog NanR - Bacteroidaceae
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Phylum: | Bacteroidetes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - ROK
- By effector - N-acetylglucosamine
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | 5 | 2 |
| Bacteroides coprophilus DSM 18228 | 9 | 2 |
| Bacteroides dorei DSM 17855 | 18 | 4 |
| Bacteroides eggerthii DSM 20697 | 12 | 4 |
| Bacteroides fragilis NCTC 9343 | 25 | 7 |
| Bacteroides ovatus ATCC 8483 | 18 | 4 |
| Bacteroides plebeius DSM 17135 | 6 | 5 |
| Bacteroides stercoris ATCC 43183 | 13 | 5 |
| Bacteroides thetaiotaomicron VPI-5482 | 10 | 3 |
| Bacteroides uniformis ATCC 8492 | 9 | 5 |
| Bacteroides vulgatus ATCC 8482 | 18 | 5 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| BT0434 |
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*
Bacteroides ovatus ATCC 8483 Site: position = -100 score = 5.93026 sequence = TTAATAAAATATTTTATTATCTA Site: position = -103 score = 6.32503 sequence = TTATTAATAAAATATTTTATTAT Gene: BACOVA_01792: NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -98 score = 6.32503 sequence = TTATTAATAAAATATTTTATTAT Site: position = -95 score = 5.93026 sequence = TTAATAAAATATTTTATTATCTA Gene: BT0434: NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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NTP pyrophosphohydrolases including oxidative damage repair enzymes |
| SSF51445 |
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Gene: BACOVA_01793: Glycoside hydrolase, superfamily SSF51445 |
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Gene: BT0435: Glycoside hydrolase, superfamily SSF51445 |
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Glycoside hydrolase, superfamily SSF51445 |
| nanJ |
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Gene: BACOVA_01794: Predicted sialic acid transporter, AraJ-MFS family |
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Gene: BT0436: Predicted sialic acid transporter, AraJ-MFS family |
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Predicted sialic acid transporter, AraJ-MFS family |
| nanE-II |
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Gene: BACOVA_01795: N-acylglucosamine 2-epimerase (EC 5.1.3.8) |
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2
Bacteroides thetaiotaomicron VPI-5482 Gene: BT0437: N-acylglucosamine 2-epimerase (EC 5.1.3.8) Gene: BT0453: N-acylglucosamine 2-epimerase (EC 5.1.3.8) |
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N-acylglucosamine 2-epimerase (EC 5.1.3.8) |
| susC_Nan-4 |
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Gene: BACOVA_01796: TonB-dependent outer membrane transporter of sialic acid oligomers |
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Gene: BT0452: TonB-dependent outer membrane transporter of sialic acid oligomers |
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TonB-dependent outer membrane transporter of sialic acid oligomers |
| susD_Nan-4 |
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Gene: BACOVA_01797: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BT0451: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Outer membrane polysaccharide binding protein for sialic acid oligomers |
| BT0450 |
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Gene: BACOVA_01798: hypothetical protein |
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Gene: BT0450: hypothetical protein |
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hypothetical protein |
| PF09992 |
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Gene: BACOVA_01799: Predicted periplasmic protein, PF09992 family |
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Predicted periplasmic protein, PF09992 family |
| PF02638 |
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Gene: BACOVA_01800: S-layer related protein precursor, sialic acid-specific 9-O-acetylesterase |
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Gene: BT0449: S-layer related protein precursor, sialic acid-specific 9-O-acetylesterase |
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S-layer related protein precursor, sialic acid-specific 9-O-acetylesterase |
| agaN |
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Gene: BT0438: Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
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Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
| CRON 2. | ||||||||||||
| fucA |
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Gene: BACEGG_02302: Alpha-L-fucosidase (EC 3.2.1.51) |
*
Bacteroides fragilis NCTC 9343 Site: position = -21 score = 5.28989 sequence = TATTTAATATAATTATATAATAT Gene: BF1796: Alpha-L-fucosidase (EC 3.2.1.51) |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -92 score = 6.08724 sequence = TTTTTAATAAATTATTTTATTAA Gene: BVU_2433: Alpha-L-fucosidase (EC 3.2.1.51) |
Alpha-L-fucosidase (EC 3.2.1.51) |
| susC_Nan-5 |
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*
Bacteroides dorei DSM 17855 Site: position = -163 score = 4.79853 sequence = GTTATAATAAAATATTTTTGTTT Site: position = -160 score = 4.95787 sequence = ATAATAAAATATTTTTGTTTATA Gene: BACDOR_01206: TonB-dependent outer membrane transporter of sialic acid oligomers |
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*
Bacteroides fragilis NCTC 9343 Site: position = -39 score = 5.29347 sequence = ATTATAATTTTCTTTATTATTAA Gene: BF1719: TonB-dependent outer membrane transporter of sialic acid oligomers |
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*
Bacteroides plebeius DSM 17135 Site: position = -267 score = 5.20857 sequence = TATATAAATAATATTTTTATCAT Site: position = -156 score = 5.01146 sequence = TTCATAAAATATTTTATCAAATA Gene: BACPLE_00590: TonB-dependent outer membrane transporter of sialic acid oligomers |
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Gene: BVU_2432: TonB-dependent outer membrane transporter of sialic acid oligomers |
TonB-dependent outer membrane transporter of sialic acid oligomers |
| susD_Nan-5 |
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Gene: BACDOR_01207: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BF1720: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BACPLE_00589: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BVU_2431: Outer membrane polysaccharide binding protein for sialic acid oligomers |
Outer membrane polysaccharide binding protein for sialic acid oligomers |
| CRON 3. | ||||||||||||
| susC_Nan-6 |
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*
Bacteroides stercoris ATCC 43183 Site: position = -25 score = 5.29203 sequence = TAAATAACCAATTAAATTAATAT Gene: BACSTE_02458: TonB-dependent outer membrane transporter of sialic acid oligomers |
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*
Bacteroides uniformis ATCC 8492 Site: position = -25 score = 5.62419 sequence = TTAATAACTAATTAAATTAATAT Site: position = -21 score = 4.82124 sequence = TAACTAATTAAATTAATATTTAT Gene: BACUNI_01022: TonB-dependent outer membrane transporter of sialic acid oligomers |
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TonB-dependent outer membrane transporter of sialic acid oligomers |
| susD_Nan-6 |
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Gene: BACSTE_02457: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BACUNI_01023: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Outer membrane polysaccharide binding protein for sialic acid oligomers |
| CRON 4. | ||||||||||||
| exbB |
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Bacteroides cellulosilyticus DSM 14838 Site: position = -44 score = 5.68674 sequence = ATAATAAACAAATTAATTAATTA Gene: BACCELL_01010: Outer membrane transport system, transport protein ExbB |
*
Bacteroides coprophilus DSM 18228 Site: position = -43 score = 5.02072 sequence = TTTATAAACTATTAATTAATTAA Gene: BACCOPRO_02433: Outer membrane transport system, transport protein ExbB |
Gene: BACDOR_03120: Outer membrane transport system, transport protein ExbB |
*
Bacteroides eggerthii DSM 20697 Site: position = -44 score = 5.4656 sequence = ATAATAAGTAATTTAATTAATTA Gene: BACEGG_00309: Outer membrane transport system, transport protein ExbB |
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Bacteroides fragilis NCTC 9343 Site: position = -43 score = 5.46923 sequence = ATAATAATAATTTAATTAATTAA Gene: BF3530: Outer membrane transport system, transport protein ExbB |
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Bacteroides ovatus ATCC 8483 Site: position = -39 score = 4.81098 sequence = ATAATAATCAATTAATTAATCTT Gene: BACOVA_00648: Outer membrane transport system, transport protein ExbB |
Gene: BACPLE_03178: Outer membrane transport system, transport protein ExbB |
*
Bacteroides stercoris ATCC 43183 Site: position = -44 score = 5.4656 sequence = ATAATAAGTAATTTAATTAATTA Gene: BACSTE_03148: Outer membrane transport system, transport protein ExbB |
*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -39 score = 4.81098 sequence = ATAATAATCAATTAATTAATCTT Gene: BT2055: Outer membrane transport system, transport protein ExbB |
*
Bacteroides uniformis ATCC 8492 Site: position = -44 score = 5.91523 sequence = ATAATAAATAAATTAATTAATTA Gene: BACUNI_01658: Outer membrane transport system, transport protein ExbB |
Gene: BVU_1942: Outer membrane transport system, transport protein ExbB |
Outer membrane transport system, transport protein ExbB |
| BACCELL_01011 |
Gene: BACCELL_01011: hypothetical protein |
Gene: BACCOPRO_02432: hypothetical protein |
Gene: BACDOR_03119: hypothetical protein |
Gene: BACEGG_00310: hypothetical protein |
Gene: BF3529: hypothetical protein |
Gene: BACOVA_00649: hypothetical protein |
Gene: BACPLE_03177: hypothetical protein |
Gene: BACSTE_03147: hypothetical protein |
Gene: BT2054: hypothetical protein |
Gene: BACUNI_01657: hypothetical protein |
Gene: BVU_1943: hypothetical protein |
hypothetical protein |
| exbD |
Gene: BACCELL_01012: Outer membrane transport system, transport protein ExbD |
Gene: BACCOPRO_02431: Outer membrane transport system, transport protein ExbD |
Gene: BACDOR_03118: Outer membrane transport system, transport protein ExbD |
Gene: BACEGG_00311: Outer membrane transport system, transport protein ExbD |
Gene: BF3528: Outer membrane transport system, transport protein ExbD |
Gene: BACOVA_00650: Outer membrane transport system, transport protein ExbD |
Gene: BACPLE_03176: Outer membrane transport system, transport protein ExbD |
Gene: BACSTE_03146: Outer membrane transport system, transport protein ExbD |
Gene: BT2053: Outer membrane transport system, transport protein ExbD |
Gene: BACUNI_01656: Outer membrane transport system, transport protein ExbD |
Gene: BVU_1944: Outer membrane transport system, transport protein ExbD |
Outer membrane transport system, transport protein ExbD |
| exbD2 |
Gene: BACCELL_01013: Outer membrane transport system, transport protein ExbD |
Gene: BACCOPRO_02430: Outer membrane transport system, transport protein ExbD |
Gene: BACDOR_03117: Outer membrane transport system, transport protein ExbD |
Gene: BACEGG_00312: Outer membrane transport system, transport protein ExbD |
Gene: BF3527: Outer membrane transport system, transport protein ExbD |
Gene: BACOVA_00651: Outer membrane transport system, transport protein ExbD |
Gene: BACPLE_03175: Outer membrane transport system, transport protein ExbD |
Gene: BACSTE_03145: Outer membrane transport system, transport protein ExbD |
Gene: BT2052: Outer membrane transport system, transport protein ExbD |
Gene: BACUNI_01655: Outer membrane transport system, transport protein ExbD |
Gene: BVU_1945: Outer membrane transport system, transport protein ExbD |
Outer membrane transport system, transport protein ExbD |
| CRON 5. | ||||||||||||
| nanT-II |
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Gene: BACCOPRO_02520: Predicted N-acetyl-neuraminate transporter, MFS family |
Gene: BACDOR_00692: Predicted N-acetyl-neuraminate transporter, MFS family |
*
Bacteroides eggerthii DSM 20697 Site: position = -85 score = 5.98357 sequence = TTAATAAAATAATTTATTAAATA Gene: BACEGG_02293: Predicted N-acetyl-neuraminate transporter, MFS family |
3
Bacteroides fragilis NCTC 9343 Gene: BF3708: Predicted N-acetyl-neuraminate transporter, MFS family Gene: BF4054: Predicted N-acetyl-neuraminate transporter, MFS family Gene: BF1714: Predicted N-acetyl-neuraminate transporter, MFS family |
2
Bacteroides ovatus ATCC 8483 Gene: BACOVA_00272: Predicted N-acetyl-neuraminate transporter, MFS family Gene: BACOVA_04187: Predicted N-acetyl-neuraminate transporter, MFS family |
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*
Bacteroides stercoris ATCC 43183 Site: position = -94 score = 5.81104 sequence = TATTTAATAAAATAAATTATTAA Gene: BACSTE_01904: Predicted N-acetyl-neuraminate transporter, MFS family |
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Gene: BVU_4119: Predicted N-acetyl-neuraminate transporter, MFS family |
Predicted N-acetyl-neuraminate transporter, MFS family |
| nanA |
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*
Bacteroides coprophilus DSM 18228 Site: position = -30 score = 5.75396 sequence = TAAATAAATAATTTTATTAAATA Gene: BACCOPRO_02518: N-acetylneuraminate lyase (EC 4.1.3.3) |
*
Bacteroides dorei DSM 17855 Site: position = -111 score = 5.53927 sequence = TTATTAATAAATAAATTTAGTTT Site: position = -40 score = 4.80072 sequence = TAAGTAATATAAAATATTCATTT Gene: BACDOR_00694: N-acetylneuraminate lyase (EC 4.1.3.3) |
Gene: BACEGG_02294: N-acetylneuraminate lyase (EC 4.1.3.3) |
*
Bacteroides fragilis NCTC 9343 Site: position = -150 score = 6.32503 sequence = TTATTAATAAAATATTTTATTAT Site: position = -41 score = 5.28468 sequence = ATATTAAAAATCTATATCATTAA Gene: BF1712: N-acetylneuraminate lyase (EC 4.1.3.3) |
*
Bacteroides ovatus ATCC 8483 Site: position = -194 score = 4.87603 sequence = AAAATAACTAAATATATTAAACT Gene: BACOVA_00275: N-acetylneuraminate lyase (EC 4.1.3.3) |
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Gene: BACSTE_01905: N-acetylneuraminate lyase (EC 4.1.3.3) |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -111 score = 5.53927 sequence = TTATTAATAAATAAATTTAGTTT Site: position = -108 score = 5.16778 sequence = TTAATAAATAAATTTAGTTTTTA Site: position = -40 score = 4.80072 sequence = TAAGTAATATAAAATATTCATTT Gene: BVU_4117: N-acetylneuraminate lyase (EC 4.1.3.3) |
N-acetylneuraminate lyase (EC 4.1.3.3) |
| nanE-II |
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Gene: BACCOPRO_02519: N-acetylmannosamine 2-epimerase |
Gene: BACDOR_00693: N-acetylmannosamine 2-epimerase |
Gene: BACEGG_02295: N-acetylmannosamine 2-epimerase |
2
Bacteroides fragilis NCTC 9343 Gene: BF4053: N-acetylmannosamine 2-epimerase Gene: BF1713: N-acetylmannosamine 2-epimerase |
Gene: BACOVA_00274: N-acetylmannosamine 2-epimerase |
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Gene: BACSTE_01906: N-acetylmannosamine 2-epimerase |
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Gene: BVU_4118: N-acetylmannosamine 2-epimerase |
N-acetylmannosamine 2-epimerase |
| susC_Nan-1 |
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Gene: BACEGG_02296: TonB-dependent outer membrane transporter of sialic acid oligomers |
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Gene: BACOVA_00281: TonB-dependent outer membrane transporter of sialic acid oligomers |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -38 score = 5.0034 sequence = AAGTTCATTTAATTTTTTAATTA Site: position = -18 score = 5.09965 sequence = TTAATAAATTACTAATTTATGAA Gene: BVU_2029: TonB-dependent outer membrane transporter of sialic acid oligomers |
TonB-dependent outer membrane transporter of sialic acid oligomers |
| susD_Nan-1 |
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2
Bacteroides eggerthii DSM 20697 Gene: BACEGG_02297: Outer membrane polysaccharide binding protein for sialic acid oligomers Gene: BACEGG_02299: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BACOVA_00280: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BVU_2030: Outer membrane polysaccharide binding protein for sialic acid oligomers |
Outer membrane polysaccharide binding protein for sialic acid oligomers |
| GH43 |
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Gene: BACEGG_02298: Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
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2
Bacteroides ovatus ATCC 8483 Gene: BACOVA_00279: Glycosyl hydrolase family 43, five-bladed beta-propellor domain Gene: BACOVA_00278: Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -5 score = 4.97964 sequence = TAATTATGAAAGTATTTTATTAT Gene: BVU_2031: Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
| nanH2 |
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2
Bacteroides stercoris ATCC 43183 Gene: BACSTE_01908: Sialidase (EC 3.2.1.18) Gene: nanH2: Sialidase (EC 3.2.1.18) |
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Sialidase (EC 3.2.1.18) |
| PF04074 |
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Gene: BACCOPRO_02521: Conserved hypothetical protein, PF04074 family |
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*
Bacteroides eggerthii DSM 20697 Site: position = -94 score = 6.22136 sequence = ATAATAAAATAATTTATTAATTA Gene: BACEGG_02292: Conserved hypothetical protein, PF04074 family |
Gene: BF1715: Conserved hypothetical protein, PF04074 family |
Gene: BACOVA_00273: Conserved hypothetical protein, PF04074 family |
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*
Bacteroides stercoris ATCC 43183 Site: position = -92 score = 5.96268 sequence = ATAATAAAATAATTTATTATATA Gene: BACSTE_01903: Conserved hypothetical protein, PF04074 family |
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Conserved hypothetical protein, PF04074 family |
| nanH |
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Gene: BACCOPRO_02522: Sialidase (EC 3.2.1.18) |
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Gene: BF3709: Sialidase (EC 3.2.1.18) |
Gene: BACOVA_04188: Sialidase (EC 3.2.1.18) |
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Gene: BACSTE_01982: Sialidase (EC 3.2.1.18) |
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Sialidase (EC 3.2.1.18) |
| nagB |
Gene: BACCELL_03156: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACCOPRO_00900: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACDOR_00691: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACEGG_00885: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BF0905: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACOVA_04936: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
*
Bacteroides plebeius DSM 17135 Site: position = -122 score = 4.85633 sequence = TAAAAAATCTATTTTTTTATTTG Gene: BACPLE_01828: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACSTE_03266: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BT4127: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BACUNI_03579: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BVU_4120: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
| nagB-II |
Gene: BACCELL_05102: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACCOPRO_00899: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACDOR_00690: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACEGG_02099: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
*
Bacteroides fragilis NCTC 9343 Site: position = -128 score = 4.75556 sequence = TAGGTAAAAAAAGATTTTAATTT Gene: BF2953: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACOVA_00411: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACPLE_01827: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BACSTE_01808: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BT0258: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
*
Bacteroides uniformis ATCC 8492 Site: position = -18 score = 5.3183 sequence = TTATTAATAATAAATTTTATGAA Gene: BACUNI_01404: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Gene: BVU_4121: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
| CRON 6. | ||||||||||||
| nanR |
*
Bacteroides cellulosilyticus DSM 14838 Site: position = -37 score = 5.47192 sequence = ATATTAATAAAATTATTAAGTAT Gene: BACCELL_04950: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
Gene: BACCOPRO_02516: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides dorei DSM 17855 Site: position = -217 score = 5.53927 sequence = AAACTAAATTTATTTATTAATAA Gene: BACDOR_00695: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides eggerthii DSM 20697 Site: position = -58 score = 6.22136 sequence = TAATTAATAAATTATTTTATTAT Gene: BACEGG_02291: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides fragilis NCTC 9343 Site: position = -52 score = 4.79728 sequence = TTAATAAACAAATTAACTATCTT Gene: BF1711: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides ovatus ATCC 8483 Site: position = -50 score = 5.75913 sequence = TTAATAAAAAAATTAATTATCTT Gene: BACOVA_01791: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides plebeius DSM 17135 Site: position = -88 score = 5.43526 sequence = TAAATATAATAATTTATTAATGA Gene: BACPLE_00597: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides stercoris ATCC 43183 Site: position = -242 score = 5.96268 sequence = TATATAATAAATTATTTTATTAT Gene: BACSTE_01902: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -51 score = 5.75913 sequence = TTAATAAAAAAATTAATTATCTT Gene: BT0433: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides uniformis ATCC 8492 Site: position = -52 score = 5.09036 sequence = AATTTACAAAATTATTTTAGTAT Gene: BACUNI_02075: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
*
Bacteroides vulgatus ATCC 8482 Site: position = -190 score = 5.53927 sequence = AAACTAAATTTATTTATTAATAA Gene: BVU_4116: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
| CRON 7. | ||||||||||||
| nanH |
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*
Bacteroides dorei DSM 17855 Site: position = -47 score = 4.76537 sequence = ATTTCAATAAAAACTTTTATTTT Gene: BACDOR_00663: Sialidase (EC 3.2.1.18) |
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*
Bacteroides fragilis NCTC 9343 Site: position = -91 score = 5.56788 sequence = TATATAATAAAATATTTAATTAA Site: position = -88 score = 6.09964 sequence = ATAATAAAATATTTAATTAATAT Gene: BF1806: Sialidase (EC 3.2.1.18) |
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Gene: BACSTE_01982: Sialidase (EC 3.2.1.18) |
Gene: BT0455: Sialidase (EC 3.2.1.18) |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -47 score = 4.76537 sequence = ATTTCAATAAAAACTTTTATTTT Gene: BVU_4143: Sialidase (EC 3.2.1.18) |
Sialidase (EC 3.2.1.18) |
| nahA |
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Gene: BACCOPRO_02672: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACDOR_00664: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BF1807: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BT0456: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BVU_4142: Beta-hexosaminidase (EC 3.2.1.52) |
Beta-hexosaminidase (EC 3.2.1.52) |
| estA |
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Gene: BACDOR_00665: Sialate-O-acetyltransferase |
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Gene: BF1808: Sialate-O-acetyltransferase |
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Gene: BACPLE_00586: Sialate-O-acetyltransferase |
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Gene: BVU_4141: Sialate-O-acetyltransferase |
Sialate-O-acetyltransferase |
| estS |
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Gene: BACCOPRO_02673: Sialic acid-specific 9-O-acetylesterase |
Gene: BACDOR_00666: Sialic acid-specific 9-O-acetylesterase |
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Gene: BF1809: Sialic acid-specific 9-O-acetylesterase |
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Gene: BACPLE_00585: Sialic acid-specific 9-O-acetylesterase |
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Gene: BT0457: Sialic acid-specific 9-O-acetylesterase |
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Gene: BVU_4140: Sialic acid-specific 9-O-acetylesterase |
Sialic acid-specific 9-O-acetylesterase |
| bmnA |
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Gene: BACCOPRO_00890: Beta-mannosidase (EC 3.2.1.25) |
Gene: BACDOR_00667: Beta-mannosidase (EC 3.2.1.25) |
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Gene: BF1810: Beta-mannosidase (EC 3.2.1.25) |
Gene: BACOVA_00562: Beta-mannosidase (EC 3.2.1.25) |
Gene: BACPLE_00244: Beta-mannosidase (EC 3.2.1.25) |
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Gene: BT0458: Beta-mannosidase (EC 3.2.1.25) |
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Gene: BVU_4139: Beta-mannosidase (EC 3.2.1.25) |
Beta-mannosidase (EC 3.2.1.25) |
| nahB |
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Gene: BACCOPRO_00891: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACDOR_00668: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BF1811: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACOVA_00560: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACPLE_00243: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BT0459: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BVU_4138: Beta-hexosaminidase (EC 3.2.1.52) |
Beta-hexosaminidase (EC 3.2.1.52) |
| nanM |
|
Gene: BACCOPRO_02517: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
Gene: BACDOR_00669: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
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Gene: BF1812: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
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*
Bacteroides plebeius DSM 17135 Site: position = -234 score = 5.43526 sequence = TCATTAATAAATTATTATATTTA Gene: BACPLE_00596: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
Gene: BACSTE_01984: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
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Gene: BVU_4137: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
| nahC |
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Gene: BACCOPRO_00892: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACDOR_00670: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BF1813: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACOVA_00559: Beta-hexosaminidase (EC 3.2.1.52) |
*
Bacteroides plebeius DSM 17135 Site: position = -81 score = 4.98089 sequence = ATAATAAATTTATATATTTACAT Gene: BACPLE_02962: Beta-hexosaminidase (EC 3.2.1.52) |
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Gene: BT0460: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BACUNI_01184: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: BVU_4136: Beta-hexosaminidase (EC 3.2.1.52) |
Beta-hexosaminidase (EC 3.2.1.52) |
| manA |
Gene: BACCELL_03390: Alpha-1,2-mannosidase |
Gene: BACCOPRO_00893: Alpha-1,2-mannosidase |
Gene: BACDOR_00671: Alpha-1,2-mannosidase |
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*
Bacteroides fragilis NCTC 9343 Site: position = -27 score = 5.13231 sequence = ATATTAATAAATAATAGTATTGA Gene: BF1814: Alpha-1,2-mannosidase |
Gene: BACOVA_04111: Alpha-1,2-mannosidase |
Gene: BACPLE_00486: Alpha-1,2-mannosidase |
Gene: BACSTE_03539: Alpha-1,2-mannosidase |
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Gene: BACUNI_02635: Alpha-1,2-mannosidase |
Gene: BVU_4135: Alpha-1,2-mannosidase |
Alpha-1,2-mannosidase |
| bgaA |
Gene: BACCELL_05450: Beta-galactosidase (EC 3.2.1.23) |
Gene: BACCOPRO_00203: Beta-galactosidase (EC 3.2.1.23) |
Gene: BACDOR_00672: Beta-galactosidase (EC 3.2.1.23) |
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Gene: BF1815: Beta-galactosidase (EC 3.2.1.23) |
Gene: BACOVA_05487: Beta-galactosidase (EC 3.2.1.23) |
Gene: BACPLE_00247: Beta-galactosidase (EC 3.2.1.23) |
Gene: BACSTE_01654: Beta-galactosidase (EC 3.2.1.23) |
Gene: BT0461: Beta-galactosidase (EC 3.2.1.23) |
*
Bacteroides uniformis ATCC 8492 Site: position = -26 score = 4.96758 sequence = ATATTAACAAAATCTTTTAAAGA Gene: BACUNI_01205: Beta-galactosidase (EC 3.2.1.23) |
Gene: BVU_4134: Beta-galactosidase (EC 3.2.1.23) |
Beta-galactosidase (EC 3.2.1.23) |
| susC_Nan-3 |
Gene: BACCELL_04824: TonB-dependent outer membrane transporter of sialic acid oligomers |
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Gene: BF1816: TonB-dependent outer membrane transporter of sialic acid oligomers |
Gene: BACOVA_00558: TonB-dependent outer membrane transporter of sialic acid oligomers |
Gene: BACPLE_00727: TonB-dependent outer membrane transporter of sialic acid oligomers |
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Gene: BT0483: TonB-dependent outer membrane transporter of sialic acid oligomers |
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TonB-dependent outer membrane transporter of sialic acid oligomers |
| susD_Nan-3 |
Gene: BACCELL_04823: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BF1817: Outer membrane polysaccharide binding protein for sialic acid oligomers |
Gene: BACOVA_00557: Outer membrane polysaccharide binding protein for sialic acid oligomers |
Gene: BACPLE_00728: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Gene: BT0484: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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Outer membrane polysaccharide binding protein for sialic acid oligomers |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |