Regulon of NanR in Bacteroides plebeius DSM 17135
| Regulator type: | Transcription factor |
| TF locus tag: | BACPLE_00597 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Regulog: | NanR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - ROK
- By effector - N-acetylglucosamine
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
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Position: -81
Score: 5 Sequence: ATAATAAATTTATATATTTACAT
Locus tag: BACPLE_02962
Name: nahC Funciton: Beta-hexosaminidase (EC 3.2.1.52) |
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nahC
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Beta-hexosaminidase (EC 3.2.1.52)
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Position: -234
Score: 5.4 Sequence: TCATTAATAAATTATTATATTTA
Locus tag: BACPLE_00596
Name: nanM Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
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nanM
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Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
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Position: -88
Score: 5.4 Sequence: TAAATATAATAATTTATTAATGA
Locus tag: BACPLE_00597
Name: nanR Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
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nanR
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Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
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Position: -122
Score: 4.9 Sequence: TAAAAAATCTATTTTTTTATTTG
Locus tag: BACPLE_01828
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Position: -267
Score: 5.2 Sequence: TATATAAATAATATTTTTATCAT
Position: -156
Score: 5 Sequence: TTCATAAAATATTTTATCAAATA
Locus tag: BACPLE_00590
Name: susC_Nan-5 Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BACPLE_00589
Name: susD_Nan-5 Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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susC_Nan-5
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TonB-dependent outer membrane transporter of sialic acid oligomers
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susD_Nan-5
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Outer membrane polysaccharide binding protein for sialic acid oligomers
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |