Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NanR in Bacteroides fragilis NCTC 9343

Properties
Regulator type: Transcription factor
TF locus tag: BF1711
Regulator family: ROK
Regulation mode: repressor
Biological process: Sialic acid utilization; N-acetylglucosamine utilization
Effector: N-acetylglucosamine; N-acetylneuraminic acid
Regulog: NanR - Bacteroidaceae
Statistics of regulated genes:
- Genes 25
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 59 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 4.8
Sequence: TTAATAAACAAATTAACTATCTT
Locus tag: BF1711
Name: nanR
Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
BF1711
nanR
Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
Position: -128
Score: 4.8
Sequence: TAGGTAAAAAAAGATTTTAATTT
Locus tag: BF2953
Name: nagB-II
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89)
BF2953
nagB-II
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89)
Position: -91
Score: 5.6
Sequence: TATATAATAAAATATTTAATTAA
Position: -88
Score: 6.1
Sequence: ATAATAAAATATTTAATTAATAT
Position: -27
Score: 5.1
Sequence: ATATTAATAAATAATAGTATTGA
Locus tag: BF1806
Name: nanH
Funciton: Sialidase (EC 3.2.1.18)
Locus tag: BF1807
Name: nahA
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
Locus tag: BF1808
Name: estA
Funciton: Sialate-O-acetyltransferase
Locus tag: BF1809
Name: estS
Funciton: Sialic acid-specific 9-O-acetylesterase
Locus tag: BF1810
Name: bmnA
Funciton: Beta-mannosidase (EC 3.2.1.25)
Locus tag: BF1811
Name: nahB
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
Locus tag: BF1812
Name: nanM
Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
Locus tag: BF1813
Name: nahC
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
Locus tag: BF1814
Name: manA
Funciton: Alpha-1,2-mannosidase
Locus tag: BF1815
Name: bgaA
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: BF1816
Name: susC_Nan-3
Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BF1817
Name: susD_Nan-3
Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
BF1806
nanH
Sialidase (EC 3.2.1.18)
BF1807
nahA
Beta-hexosaminidase (EC 3.2.1.52)
BF1808
estA
Sialate-O-acetyltransferase
BF1809
estS
Sialic acid-specific 9-O-acetylesterase
BF1810
bmnA
Beta-mannosidase (EC 3.2.1.25)
BF1811
nahB
Beta-hexosaminidase (EC 3.2.1.52)
BF1812
nanM
Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
BF1813
nahC
Beta-hexosaminidase (EC 3.2.1.52)
BF1814
manA
Alpha-1,2-mannosidase
BF1815
bgaA
Beta-galactosidase (EC 3.2.1.23)
BF1816
susC_Nan-3
TonB-dependent outer membrane transporter of sialic acid oligomers
BF1817
susD_Nan-3
Outer membrane polysaccharide binding protein for sialic acid oligomers
Position: -150
Score: 6.3
Sequence: TTATTAATAAAATATTTTATTAT
Position: -41
Score: 5.3
Sequence: ATATTAAAAATCTATATCATTAA
Locus tag: BF1712
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: BF1713
Name: nanE-II
Funciton: N-acetylmannosamine 2-epimerase
Locus tag: BF1714
Name: nanT-II
Funciton: Predicted N-acetyl-neuraminate transporter, MFS family
Locus tag: BF1715
Name: PF04074
Funciton: Conserved hypothetical protein, PF04074 family
BF1712
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)
BF1713
nanE-II
N-acetylmannosamine 2-epimerase
BF1714
nanT-II
Predicted N-acetyl-neuraminate transporter, MFS family
BF1715
PF04074
Conserved hypothetical protein, PF04074 family
Position: -39
Score: 5.3
Sequence: ATTATAATTTTCTTTATTATTAA
Locus tag: BF1719
Name: susC_Nan-5
Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BF1720
Name: susD_Nan-5
Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
BF1719
susC_Nan-5
TonB-dependent outer membrane transporter of sialic acid oligomers
BF1720
susD_Nan-5
Outer membrane polysaccharide binding protein for sialic acid oligomers
Position: -21
Score: 5.3
Sequence: TATTTAATATAATTATATAATAT
Locus tag: BF1796
Name: fucA
Funciton: Alpha-L-fucosidase (EC 3.2.1.51)
BF1796
fucA
Alpha-L-fucosidase (EC 3.2.1.51)
Position: -43
Score: 5.5
Sequence: ATAATAATAATTTAATTAATTAA
Locus tag: BF3530
Name: exbB
Funciton: Outer membrane transport system, transport protein ExbB
Locus tag: BF3529
Name: null
Funciton: hypothetical protein
Locus tag: BF3528
Name: exbD
Funciton: Outer membrane transport system, transport protein ExbD
Locus tag: BF3527
Name: exbD2
Funciton: Outer membrane transport system, transport protein ExbD
BF3530
exbB
Outer membrane transport system, transport protein ExbB
BF3529
hypothetical protein
BF3528
exbD
Outer membrane transport system, transport protein ExbD
BF3527
exbD2
Outer membrane transport system, transport protein ExbD
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