Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing susD_Nan-1 gene

Properties
Regulog: NanR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Sialic acid utilization; N-acetylglucosamine utilization
Effector: N-acetylglucosamine; N-acetylneuraminic acid
Phylum: Bacteroidetes
Built upon 59 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides eggerthii DSM 20697
Position: -85
Score: 5.98357
Sequence: TTAATAAAATAATTTATTAAATA
Locus tag: BACEGG_02293
Name: nanT-II
Funciton: Predicted N-acetyl-neuraminate transporter, MFS family
Locus tag: BACEGG_02294
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: BACEGG_02295
Name: nanE-II
Funciton: N-acetylmannosamine 2-epimerase
Locus tag: BACEGG_02296
Name: susC_Nan-1
Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BACEGG_02297
Name: susD_Nan-1
Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
Locus tag: BACEGG_02298
Name: GH43
Funciton: Glycosyl hydrolase family 43, five-bladed beta-propellor domain
nanT-II-nanA-nanE-II-susC_Nan-1-susD_Nan-1-GH43 -85 6 TTAATAAAATAATTTATTAAATA BACEGG_02293
Bacteroides vulgatus ATCC 8482
Position: -38
Score: 5.0034
Sequence: AAGTTCATTTAATTTTTTAATTA
Position: -18
Score: 5.09965
Sequence: TTAATAAATTACTAATTTATGAA
Position: -5
Score: 4.97964
Sequence: TAATTATGAAAGTATTTTATTAT
Locus tag: BVU_2029
Name: susC_Nan-1
Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BVU_2030
Name: susD_Nan-1
Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
Locus tag: BVU_2031
Name: GH43
Funciton: Glycosyl hydrolase family 43, five-bladed beta-propellor domain
susC_Nan-1-susD_Nan-1-GH43 -38 5 AAGTTCATTTAATTTTTTAATTA BVU_2029
-18 5.1 TTAATAAATTACTAATTTATGAA
-5 5 TAATTATGAAAGTATTTTATTAT