Regulon of NanR in Bacteroides stercoris ATCC 43183
| Regulator type: | Transcription factor |
| TF locus tag: | BACSTE_01902 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Regulog: | NanR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - ROK
- By effector - N-acetylglucosamine
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -94
Score: 5.8 Sequence: TATTTAATAAAATAAATTATTAA
Locus tag: BACSTE_01904
Name: nanT-II Funciton: Predicted N-acetyl-neuraminate transporter, MFS family
Locus tag: BACSTE_01905
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: BACSTE_01906
Name: nanE-II Funciton: N-acetylmannosamine 2-epimerase
Locus tag: nanH2
Name: nanH2 Funciton: Sialidase (EC 3.2.1.18)
Locus tag: BACSTE_01908
Name: nanH2 Funciton: Sialidase (EC 3.2.1.18) |
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nanT-II
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Predicted N-acetyl-neuraminate transporter, MFS family
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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nanE-II
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N-acetylmannosamine 2-epimerase
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nanH2
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Sialidase (EC 3.2.1.18)
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nanH2
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Sialidase (EC 3.2.1.18)
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Position: -92
Score: 6 Sequence: ATAATAAAATAATTTATTATATA
Locus tag: BACSTE_01903
Name: PF04074 Funciton: Conserved hypothetical protein, PF04074 family |
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PF04074
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Conserved hypothetical protein, PF04074 family
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Position: -242
Score: 6 Sequence: TATATAATAAATTATTTTATTAT
Locus tag: BACSTE_01902
Name: nanR Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
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nanR
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Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
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Position: -25
Score: 5.3 Sequence: TAAATAACCAATTAAATTAATAT
Locus tag: BACSTE_02458
Name: susC_Nan-6 Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BACSTE_02457
Name: susD_Nan-6 Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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susC_Nan-6
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TonB-dependent outer membrane transporter of sialic acid oligomers
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susD_Nan-6
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Outer membrane polysaccharide binding protein for sialic acid oligomers
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Position: -44
Score: 5.5 Sequence: ATAATAAGTAATTTAATTAATTA
Locus tag: BACSTE_03148
Name: exbB Funciton: Outer membrane transport system, transport protein ExbB
Locus tag: BACSTE_03147
Name: null Funciton: hypothetical protein
Locus tag: BACSTE_03146
Name: exbD Funciton: Outer membrane transport system, transport protein ExbD
Locus tag: BACSTE_03145
Name: exbD2 Funciton: Outer membrane transport system, transport protein ExbD |
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exbB
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Outer membrane transport system, transport protein ExbB
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hypothetical protein
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exbD
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Outer membrane transport system, transport protein ExbD
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exbD2
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Outer membrane transport system, transport protein ExbD
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |