Regulon of NanR in Bacteroides stercoris ATCC 43183

Properties
Regulator type:	Transcription factor
TF locus tag:	BACSTE_01902
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Sialic acid utilization; N-acetylglucosamine utilization
Effector:	N-acetylglucosamine; N-acetylneuraminic acid
Regulog:	NanR - Bacteroidaceae
Statistics of regulated genes:
- Genes	13
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 59 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - ROK
By effector - N-acetylglucosamine
By effector - N-acetylneuraminic acid
By pathway - Sialic acid utilization
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -94 Score: 5.8 Sequence: TATTTAATAAAATAAATTATTAA Locus tag: BACSTE_01904 Name: nanT-II Funciton: Predicted N-acetyl-neuraminate transporter, MFS family Locus tag: BACSTE_01905 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3) Locus tag: BACSTE_01906 Name: nanE-II Funciton: N-acetylmannosamine 2-epimerase Locus tag: nanH2 Name: nanH2 Funciton: Sialidase (EC 3.2.1.18) Locus tag: BACSTE_01908 Name: nanH2 Funciton: Sialidase (EC 3.2.1.18)
	BACSTE_01904	nanT-II	Predicted N-acetyl-neuraminate transporter, MFS family
	BACSTE_01905	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)
	BACSTE_01906	nanE-II	N-acetylmannosamine 2-epimerase
	nanH2	nanH2	Sialidase (EC 3.2.1.18)
	BACSTE_01908	nanH2	Sialidase (EC 3.2.1.18)
Position: -92 Score: 6 Sequence: ATAATAAAATAATTTATTATATA Locus tag: BACSTE_01903 Name: PF04074 Funciton: Conserved hypothetical protein, PF04074 family
	BACSTE_01903	PF04074	Conserved hypothetical protein, PF04074 family
Position: -242 Score: 6 Sequence: TATATAATAAATTATTTTATTAT Locus tag: BACSTE_01902 Name: nanR Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
	BACSTE_01902	nanR	Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
Position: -25 Score: 5.3 Sequence: TAAATAACCAATTAAATTAATAT Locus tag: BACSTE_02458 Name: susC_Nan-6 Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers Locus tag: BACSTE_02457 Name: susD_Nan-6 Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
	BACSTE_02458	susC_Nan-6	TonB-dependent outer membrane transporter of sialic acid oligomers
	BACSTE_02457	susD_Nan-6	Outer membrane polysaccharide binding protein for sialic acid oligomers
Position: -44 Score: 5.5 Sequence: ATAATAAGTAATTTAATTAATTA Locus tag: BACSTE_03148 Name: exbB Funciton: Outer membrane transport system, transport protein ExbB Locus tag: BACSTE_03147 Name: null Funciton: hypothetical protein Locus tag: BACSTE_03146 Name: exbD Funciton: Outer membrane transport system, transport protein ExbD Locus tag: BACSTE_03145 Name: exbD2 Funciton: Outer membrane transport system, transport protein ExbD
	BACSTE_03148	exbB	Outer membrane transport system, transport protein ExbB
	BACSTE_03147		hypothetical protein
	BACSTE_03146	exbD	Outer membrane transport system, transport protein ExbD
	BACSTE_03145	exbD2	Outer membrane transport system, transport protein ExbD

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD