Regulon of NanR in Bacteroides vulgatus ATCC 8482
| Regulator type: | Transcription factor |
| TF locus tag: | BVU_4116 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Regulog: | NanR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - ROK
- By effector - N-acetylglucosamine
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -47
Score: 4.8 Sequence: ATTTCAATAAAAACTTTTATTTT
Locus tag: BVU_4143
Name: nanH Funciton: Sialidase (EC 3.2.1.18)
Locus tag: BVU_4142
Name: nahA Funciton: Beta-hexosaminidase (EC 3.2.1.52)
Locus tag: BVU_4141
Name: estA Funciton: Sialate-O-acetyltransferase
Locus tag: BVU_4140
Name: estS Funciton: Sialic acid-specific 9-O-acetylesterase
Locus tag: BVU_4139
Name: bmnA Funciton: Beta-mannosidase (EC 3.2.1.25)
Locus tag: BVU_4138
Name: nahB Funciton: Beta-hexosaminidase (EC 3.2.1.52) |
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nanH
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Sialidase (EC 3.2.1.18)
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nahA
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Beta-hexosaminidase (EC 3.2.1.52)
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estA
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Sialate-O-acetyltransferase
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estS
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Sialic acid-specific 9-O-acetylesterase
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bmnA
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Beta-mannosidase (EC 3.2.1.25)
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nahB
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Beta-hexosaminidase (EC 3.2.1.52)
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Position: -190
Score: 5.5 Sequence: AAACTAAATTTATTTATTAATAA
Locus tag: BVU_4116
Name: nanR Funciton: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family |
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nanR
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Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
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Position: -38
Score: 5 Sequence: AAGTTCATTTAATTTTTTAATTA
Position: -18
Score: 5.1 Sequence: TTAATAAATTACTAATTTATGAA
Position: -5
Score: 5 Sequence: TAATTATGAAAGTATTTTATTAT
Locus tag: BVU_2029
Name: susC_Nan-1 Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BVU_2030
Name: susD_Nan-1 Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers
Locus tag: BVU_2031
Name: GH43 Funciton: Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
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susC_Nan-1
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TonB-dependent outer membrane transporter of sialic acid oligomers
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susD_Nan-1
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Outer membrane polysaccharide binding protein for sialic acid oligomers
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GH43
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Glycosyl hydrolase family 43, five-bladed beta-propellor domain
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Position: -111
Score: 5.5 Sequence: TTATTAATAAATAAATTTAGTTT
Position: -108
Score: 5.2 Sequence: TTAATAAATAAATTTAGTTTTTA
Position: -40
Score: 4.8 Sequence: TAAGTAATATAAAATATTCATTT
Locus tag: BVU_4117
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: BVU_4118
Name: nanE-II Funciton: N-acetylmannosamine 2-epimerase
Locus tag: BVU_4119
Name: nanT-II Funciton: Predicted N-acetyl-neuraminate transporter, MFS family
Locus tag: BVU_4120
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: BVU_4121
Name: nagB-II Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89) |
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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nanE-II
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N-acetylmannosamine 2-epimerase
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nanT-II
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Predicted N-acetyl-neuraminate transporter, MFS family
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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nagB-II
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6) / putative N-acetylglucosaminylphosphatidylinositol de-N-acetylase ( EC:3.5.1.89)
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Position: -92
Score: 6.1 Sequence: TTTTTAATAAATTATTTTATTAA
Locus tag: BVU_2433
Name: fucA Funciton: Alpha-L-fucosidase (EC 3.2.1.51)
Locus tag: BVU_2432
Name: susC_Nan-5 Funciton: TonB-dependent outer membrane transporter of sialic acid oligomers
Locus tag: BVU_2431
Name: susD_Nan-5 Funciton: Outer membrane polysaccharide binding protein for sialic acid oligomers |
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fucA
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Alpha-L-fucosidase (EC 3.2.1.51)
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susC_Nan-5
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TonB-dependent outer membrane transporter of sialic acid oligomers
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susD_Nan-5
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Outer membrane polysaccharide binding protein for sialic acid oligomers
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |