Regulon of NanR in Bacteroides coprophilus DSM 18228

Properties
Regulator type:	Transcription factor
TF locus tag:	BACCOPRO_02516
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Sialic acid utilization; N-acetylglucosamine utilization
Effector:	N-acetylglucosamine; N-acetylneuraminic acid
Regulog:	NanR - Bacteroidaceae
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 59 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - ROK
By effector - N-acetylglucosamine
By effector - N-acetylneuraminic acid
By pathway - Sialic acid utilization
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -30 Score: 5.8 Sequence: TAAATAAATAATTTTATTAAATA Locus tag: BACCOPRO_02518 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3) Locus tag: BACCOPRO_02519 Name: nanE-II Funciton: N-acetylmannosamine 2-epimerase Locus tag: BACCOPRO_02520 Name: nanT-II Funciton: Predicted N-acetyl-neuraminate transporter, MFS family Locus tag: BACCOPRO_02521 Name: PF04074 Funciton: Conserved hypothetical protein, PF04074 family Locus tag: BACCOPRO_02522 Name: nanH Funciton: Sialidase (EC 3.2.1.18)
	BACCOPRO_02518	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)
	BACCOPRO_02519	nanE-II	N-acetylmannosamine 2-epimerase
	BACCOPRO_02520	nanT-II	Predicted N-acetyl-neuraminate transporter, MFS family
	BACCOPRO_02521	PF04074	Conserved hypothetical protein, PF04074 family
	BACCOPRO_02522	nanH	Sialidase (EC 3.2.1.18)
Position: -43 Score: 5 Sequence: TTTATAAACTATTAATTAATTAA Locus tag: BACCOPRO_02433 Name: exbB Funciton: Outer membrane transport system, transport protein ExbB Locus tag: BACCOPRO_02432 Name: null Funciton: hypothetical protein Locus tag: BACCOPRO_02431 Name: exbD Funciton: Outer membrane transport system, transport protein ExbD Locus tag: BACCOPRO_02430 Name: exbD2 Funciton: Outer membrane transport system, transport protein ExbD
	BACCOPRO_02433	exbB	Outer membrane transport system, transport protein ExbB
	BACCOPRO_02432		hypothetical protein
	BACCOPRO_02431	exbD	Outer membrane transport system, transport protein ExbD
	BACCOPRO_02430	exbD2	Outer membrane transport system, transport protein ExbD

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD