Regulon of HTCS_Aga-1 in Bacteroides thetaiotaomicron VPI-5482
| Regulator type: | Transcription factor |
| TF locus tag: | BT0267 |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Arabinogalactan utilization |
| Effector: | Arabinogalactan oligosaccharides |
| Regulog: | HTCS_Aga-1 - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 17 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Arabinogalactan oligosaccharides
- By pathway - Arabinogalactan utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -238
Score: 10.4 Sequence: TGGTCTATTTTTA-(8)-TGAATGATTTTTA
Locus tag: BT0266
Name: BT0266 Funciton: Putative cellobiosidase/xylanase
Locus tag: BT0265
Name: BT0265 Funciton: Predicted endo-1,4-beta-galactase
Locus tag: BT0264
Name: BT0264 Funciton: Predicted endo-1,4-beta-galactase |
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BT0266
|
Putative cellobiosidase/xylanase
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BT0265
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Predicted endo-1,4-beta-galactase
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BT0264
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Predicted endo-1,4-beta-galactase
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Position: -121
Score: 9.3 Sequence: TTATTTATTACTG-(8)-TGAATGATTATAG
Locus tag: BT0262
Name: BT0262 Funciton: Putative hydrolase
Locus tag: BT0263
Name: BT0262 Funciton: Putative hydrolase |
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BT0262
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Putative hydrolase
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BT0262
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Putative hydrolase
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Position: -127
Score: 10.7 Sequence: TGGTCCAATTTTG-(8)-TGAATGATTAGAG
Locus tag: BT0268
Name: susC_Aga-1 Funciton: TonB-dependent outer membrane transporter of arabinogalactan oligomers
Locus tag: BT0269
Name: susD_Aga-1 Funciton: Outer membrane polysaccharide binding protein for arabinogalactan oligomers
Locus tag: BT0270
Name: BT0270 Funciton: Hypothetical protein, presumably involved in arabinogalactan utilization
Locus tag: BT0271
Name: BT0271 Funciton: Hypothetical protein, presumably involved in arabinogalactan utilization
Locus tag: BT0272
Name: susC_Aga-2 Funciton: TonB-dependent outer membrane transporter of arabinogalactan oligomers
Locus tag: BT0273
Name: susD_Aga-2 Funciton: Outer membrane polysaccharide binding protein for arabinogalactan oligomers
Locus tag: BT0274
Name: BT0274 Funciton: Putative hydrolase
Locus tag: BT0275
Name: BT0275 Funciton: Putative phosphatase
Locus tag: BT0276
Name: BT0276 Funciton: Putative hydrolase
Locus tag: BT0277
Name: BT0277 Funciton: Putative chitobiase
Locus tag: BT0278
Name: BT0278 Funciton: Phosphatase-like protein
Locus tag: BT0279
Name: BT0279 Funciton: Isomerase-like protein |
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susC_Aga-1
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TonB-dependent outer membrane transporter of arabinogalactan oligomers
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susD_Aga-1
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Outer membrane polysaccharide binding protein for arabinogalactan oligomers
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BT0270
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Hypothetical protein, presumably involved in arabinogalactan utilization
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BT0271
|
Hypothetical protein, presumably involved in arabinogalactan utilization
|
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susC_Aga-2
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TonB-dependent outer membrane transporter of arabinogalactan oligomers
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susD_Aga-2
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Outer membrane polysaccharide binding protein for arabinogalactan oligomers
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BT0274
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Putative hydrolase
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BT0275
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Putative phosphatase
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BT0276
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Putative hydrolase
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BT0277
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Putative chitobiase
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BT0278
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Phosphatase-like protein
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BT0279
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Isomerase-like protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |