Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of AraR in Bacteroides thetaiotaomicron VPI-5482

Properties
Regulator type: Transcription factor
TF locus tag: BT0354
Regulator family: NrtR
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraR - Bacteroidaceae
Statistics of regulated genes:
- Genes 28
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 28 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -329
Score: 5.1
Sequence: AAATTGTATTATCTACACTCT
Locus tag: BT4163
Name: BT4163
Funciton: Fasciclin, PF02469 family
Locus tag: BT4164
Name: susC_Rgu-3
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4165
Name: susD_Rgu-3
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4166
Name: BT4166
Funciton: hypothetical protein, DUF5075, DUF5076
Locus tag: BT4167
Name: BT4167
Funciton: Fasciclin domain, PF02469 family
Locus tag: BT4168
Name: susC_Rgu-4
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4169
Name: susD_Rgu-4
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4170
Name: pelL
Funciton: Pectate lyase L (EC 4.2.2.2)
Locus tag: BT4171
Name: BT4171
Funciton: hypothetical protein, PF16408 family
BT4163
BT4163
Fasciclin, PF02469 family
BT4164
susC_Rgu-3
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
BT4165
susD_Rgu-3
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4166
BT4166
hypothetical protein, DUF5075, DUF5076
BT4167
BT4167
Fasciclin domain, PF02469 family
BT4168
susC_Rgu-4
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
BT4169
susD_Rgu-4
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4170
pelL
Pectate lyase L (EC 4.2.2.2)
BT4171
BT4171
hypothetical protein, PF16408 family
Position: -84
Score: 5.6
Sequence: AGAGTGTATTTGATACACCAA
Position: -60
Score: 5.8
Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BT0356
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BT0355
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BT0354
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BT0353
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BT0352
Name: BT0352
Funciton: hypothetical protein
Locus tag: BT0351
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BT0350
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BT0349
Name: COG3533
Funciton: COG3533 secreted protein
Locus tag: BT0348
Name: abf1
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
BT0356
araM
L-arabinose mutarotase
BT0355
araP
Predicted sodium-dependent arabinose transporter, MFS family
BT0354
araR
Transcriptional regulator for arabinose utilization, NrtR family
BT0353
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BT0352
BT0352
hypothetical protein
BT0351
araA
L-arabinose isomerase (EC 5.3.1.4)
BT0350
araB
Ribulokinase (EC 2.7.1.16)
BT0349
COG3533
COG3533 secreted protein
BT0348
abf1
Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
Position: -167
Score: 5.7
Sequence: AAAGTGTAAAAAAGACACTTA
Locus tag: BT0365
Name: PF13385
Funciton: Concanavalin A-like lectin/glucanases superfamily
Locus tag: BT0364
Name: susC_Ara-1
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BT0363
Name: susD_Ara-1
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BT0362
Name: susC_Ara-2
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BT0361
Name: susD_Ara-2
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BT0360
Name: abn1
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
BT0365
PF13385
Concanavalin A-like lectin/glucanases superfamily
BT0364
susC_Ara-1
TonB-dependent outer membrane transporter of arabinan oligosaccharides
BT0363
susD_Ara-1
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
BT0362
susC_Ara-2
TonB-dependent outer membrane transporter of arabinan oligosaccharides
BT0361
susD_Ara-2
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
BT0360
abn1
Arabinan endo-1,5-alpha-L-arabinosidase
Position: -229
Score: 4.9
Sequence: ATAATGTAAAATCTACACTCA
Locus tag: BT3047
Name: sbp_Ara-4
Funciton: ix-beta-propeller protein, cell surface exposed, putatively involved in arabinan binding
Locus tag: BT3046
Name: susC_Ara-4
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BT3045
Name: susD_Ara-4
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BT3044
Name: BT3044
Funciton: Hypothetical protein, presumably involved in arabinan utilization
BT3047
sbp_Ara-4
ix-beta-propeller protein, cell surface exposed, putatively involved in arabinan binding
BT3046
susC_Ara-4
TonB-dependent outer membrane transporter of arabinan oligosaccharides
BT3045
susD_Ara-4
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
BT3044
BT3044
Hypothetical protein, presumably involved in arabinan utilization
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