Profile of regulator AraR in Bacteroidaceae
Properties
| Regulator family: |
NrtR |
| Regulation mode: |
repressor |
| Biological process: |
Arabinose utilization |
| Effector: |
Arabinose |
| Regulog: |
AraR - Bacteroidaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bacteroides cellulosilyticus DSM 14838
|
|
BACCELL_00858 |
abn3 |
-39 |
5.4 |
TATGTGTATTTTTGACACCCA |
|
BACCELL_05604 |
araM |
-60 |
5.8 |
AAAGTGTTACTTTTACACCCA |
|
BACCELL_05604 |
araM |
-84 |
5.6 |
CAAGTGTTACTAATACACTCA |
|
Bacteroides dorei DSM 17855
|
|
BACDOR_03634 |
araM |
-122 |
5.2 |
AAAGTGTAGGAAATACACTTT |
|
BACDOR_03634 |
araM |
-59 |
5.6 |
ATAGTGTTACTTTTACACCCA |
|
Bacteroides eggerthii DSM 20697
|
|
BACEGG_00165 |
agaL |
-46 |
5.7 |
AAGGTGTTATTTTTACACTCT |
|
BACEGG_01536 |
araM |
-84 |
5.7 |
AAAGTGTATATATTACACCAA |
|
BACEGG_00165 |
agaL |
-97 |
5 |
CAAGTGTATATGTTACACAAC |
|
BACEGG_01536 |
araM |
-60 |
5.5 |
AAAGTGTTACTTTTACACCCG |
|
Bacteroides ovatus ATCC 8483
|
|
BACOVA_03483 |
abf3 |
-138 |
5.1 |
AAAGTGTATATTTTACCCTTG |
|
BACOVA_03483 |
abf3 |
-94 |
4.8 |
TAAGTGTATAATTACCAATTA |
|
BACOVA_01715 |
araM |
-84 |
5.6 |
AGAGTGTATTTGATACACCAA |
|
BACOVA_01715 |
araM |
-60 |
5.8 |
AAAGTGTTACTTTTACACCCA |
|
Bacteroides plebeius DSM 17135
|
|
BACPLE_02644 |
abf1 |
-33 |
4.4 |
AAAGTGTGAAATAAACAAGTA |
|
BACPLE_02644 |
abf1 |
-81 |
4.5 |
AAAATGTCAAATGTACACCCA |
|
BACPLE_02214 |
araM |
-45 |
5.6 |
TAAGTGTTACTTTTACACCAT |
|
BACPLE_02216 |
araP |
-94 |
5.6 |
TTAGTGTTACTAATACACTTT |
|
Bacteroides thetaiotaomicron VPI-5482
|
|
BT0365 |
PF13385 |
-167 |
5.7 |
AAAGTGTAAAAAAGACACTTA |
|
BT4163 |
BT4163 |
-329 |
5.1 |
AAATTGTATTATCTACACTCT |
|
BT3047 |
sbp_Ara-4 |
-229 |
4.9 |
ATAATGTAAAATCTACACTCA |
|
BT0356 |
araM |
-84 |
5.6 |
AGAGTGTATTTGATACACCAA |
|
BT0356 |
araM |
-60 |
5.8 |
AAAGTGTTACTTTTACACCCA |
|
Bacteroides uniformis ATCC 8492
|
|
BACUNI_01357 |
araM |
-27 |
4.2 |
AAAGTGTACAGCCTACACTAA |
|
BACUNI_01357 |
araM |
-3 |
5.8 |
AAAGTGTTACTTTTACACCCA |
|
BACUNI_03327 |
abn3 |
-96 |
5.2 |
TAAGTGTATATGTTACACAAC |
|
BACUNI_03327 |
abn3 |
-46 |
5.4 |
ATAGTGTTAATTTTACACCCG |
|
Bacteroides vulgatus ATCC 8482
|
|
BVU_2324 |
araM |
-122 |
5.2 |
AAAGTGTAGGAAATACACTTT |
|
BVU_2324 |
araM |
-59 |
5.4 |
ATAGTGTTACTTTTACACCAA |
Export
|
Regulatory Sites
|
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|
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