Regulons of Rhodobacterales bacterium HTCC2654

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AglR	Alpha-glucoside; Maltose; Sucrose; Trehalose	Alpha-glucosides utilization	2	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	5	5
TF	CceR (GapR)	6-phosphogluconate	Central carbohydrate metabolism	17	18
TF	Chvl			1	2
TF	CueR	Copper ion, (Cu+)	Copper resistance	3	2
TF	FnrN	Oxygen	Oxidative stress response; Nitrogen fixation	8	10
TF	HrcA	Heat shock	Heat shock response	1	1
TF	Irr	Heme	Iron homeostasis	5	3
TF	IscR	Iron-sulfur cluster redox state; Iron ion, (Fe2+)	Iron-sulfur cluster biogenesis; Iron homeostasis	10	8
TF	LexA	DNA damage	SOS response	10	9
TF	LiuR		Branched-chain amino acid degradation	1	1
TF	LldR	L-lactate	Lactate utilization	2	2
TF	MetR	Homocysteine	Methionine biosynthesis	4	3
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	2
TF	ModE2	Molybdate	Molybdenum homeostasis	1	1
TF	Mur	Manganese ion, (Mn2+)	Manganese homeostasis	3	4
TF	NnrR	Nitric oxide	Denitrification	7	6
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	8	9
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	3	2
TF	PhnF		Phosphonate utilization	2	2
TF	RhaR	Rhamnose	Rhamnose utilization	3	5
TF	RutR	Uracil	Pyrimidine utilization	10	6
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	2
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	8	1
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	SAM-SAH	S-adenosylmethionine; S-adenosylhomocysteine	Methionine metabolism	1	1
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	3	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	5	2
RNA	mini-ykkC		Multidrug resistance	1	1
RNA	serC		Serine biosynthesis	1	1
RNA	ykkC-yxkD		Multidrug resistance	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Rhodobacterales bacterium HTCC2654

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --