# TF - NrdR: RB2654_05552 2689755 RB2654_04361 nrdJ # TF - Zur: RB2654_20873 2686456 RB2654_20873 zur 2686457 RB2654_20878 znuC 2686458 RB2654_20883 znuB 2686455 RB2654_20868 znuA # TF - LldR: RB2654_23238 2689672 RB2654_23243 dld 2689671 RB2654_23238 lldR # TF - NnrR: RB2654_12769 2687101 RB2654_12814 nirK 2687100 RB2654_12809 nirV 2687091 RB2654_12764 COG3794 2687090 RB2654_12759 nnrS 2687093 RB2654_12774 DUF1858 2687108 RB2654_12849 nosR 2687107 RB2654_12844 nosZ 2687106 RB2654_12839 nosD 2687105 RB2654_12834 nosF 2687104 RB2654_12829 nosY 2687103 RB2654_12824 nosL 2687102 RB2654_12819 nosX 2687094 RB2654_12779 norC 2687095 RB2654_12784 norB 2687096 RB2654_12789 norQ 2687097 RB2654_12794 norD 2687098 RB2654_12799 nnrT 2687092 RB2654_12769 nnrR # TF - IscR: RB2654_04009 2686515 RB2654_15781 hmuR 2687691 RB2654_09499 fecC 2687692 RB2654_09504 fecD 2687693 RB2654_09509 fecE 2689546 RB2654_04329 fbpA 2687690 RB2654_09494 fecB 2688903 RB2654_08847 null 2688902 RB2654_08842 hemP 2688901 RB2654_08837 null 2687170 RB2654_13154 irpA 2687168 RB2654_13144 bfd # TF - Irr: RB2654_18263 2686000 RB2654_18613 fssA 2687170 RB2654_13154 irpA 2687168 RB2654_13144 bfd 2686758 RB2654_16991 mbfA # TF - NtrC: RB2654_03219 2687035 RB2654_12489 nrtA 2687034 RB2654_12484 nrtB 2687033 RB2654_12479 nrtC 2687032 RB2654_12474 hmp 2687031 RB2654_12469 nasD 2687030 RB2654_12464 nasE 2687029 RB2654_12459 nasA 2686526 RB2654_15836 urtA 2686527 RB2654_15841 urtA 2686528 RB2654_15846 urtA 2686529 RB2654_15851 urtB 2686530 RB2654_15856 urtB 2686531 RB2654_15861 urtD 2686532 RB2654_15866 urtE 2687302 RB2654_02324 glnB 2687301 RB2654_02319 glnA 2687481 RB2654_03209 nifR3 2687482 RB2654_03214 ntrB 2687483 RB2654_03219 ntrC 2687484 RB2654_03224 ntrY 2687485 RB2654_03229 ntrX 2687928 RB2654_10683 glnK 2687929 RB2654_10688 amtB 2687037 RB2654_12499 nasT 2687036 RB2654_12494 nrtA2 # TF - Mur: RB2654_19538 2686187 RB2654_19543 sitA 2686188 RB2654_19548 sitB 2686189 RB2654_19553 sitC 2686190 RB2654_19558 sitD 2686186 RB2654_19538 mur # TF - ModE2: RB2654_14145 2688467 RB2654_14140 null 2688466 RB2654_14135 modB 2688464 RB2654_14125 null # TF - LexA: RB2654_04726 2687048 RB2654_12554 dnaE2 2689908 RB2654_21543 uvrD 2686751 RB2654_16956 imuB 2689832 RB2654_04726 lexA 2689461 RB2654_03904 recA 2690314 RB2654_05712 ruvC 2690313 RB2654_05707 ruvA 2690312 RB2654_05702 ruvB 2689842 RB2654_04776 uvrA 2689646 RB2654_02045 PF04055 2690656 RB2654_05485 PF06319 # TF - LiuR: RB2654_20563 2686394 RB2654_20563 liuR 2686393 RB2654_20558 acdH 2686392 RB2654_20553 null 2686391 RB2654_20548 null 2686390 RB2654_20543 PF04828 2686389 RB2654_20538 acdA 2686388 RB2654_20533 acdB # TF - RutR: RB2654_07801 2686466 RB2654_20923 pntD 2686467 RB2654_20928 pntA 2686468 RB2654_20933 pntB 2686469 RB2654_20938 pntC 2687868 RB2654_10383 deoC 2687867 RB2654_10378 ald 2686446 RB2654_20823 cdd 2686447 RB2654_20828 deoB 2686448 RB2654_20833 add 2686449 RB2654_20838 upp 2689183 RB2654_07801 rutR 2688638 RB2654_14990 pydX 2688636 RB2654_14980 pydX 2688631 RB2654_14955 pydC # TF - PhnF: RB2654_09759 2687742 RB2654_09754 phnG 2687741 RB2654_09749 phnH 2687740 RB2654_09744 phnI 2687739 RB2654_09739 Pden_0043 2687738 RB2654_09734 phnJ 2687737 RB2654_09729 phnK 2687736 RB2654_09724 phnL 2687735 RB2654_09719 phnN 2687743 RB2654_09759 phnF # TF - PaaR: RB2654_06364 2688178 RB2654_06384 paaZ 2688179 RB2654_06389 paaX 2688177 RB2654_06379 paaF 2688176 RB2654_06374 paaY 2688175 RB2654_06369 paaK 2688174 RB2654_06364 paaR # TF - RhaR: RB2654_09464 2687684 RB2654_09464 rhaR 2687683 RB2654_09459 rhaF 2687682 RB2654_09454 rhaG 2687681 RB2654_09449 rhaH 2687680 RB2654_09444 rhaJ 2687679 RB2654_09439 rhaM 2687678 RB2654_09434 rhaK 2687685 RB2654_09469 rhaEW 2687686 RB2654_09474 lldD 2687687 RB2654_09479 rhaI # RNA - mini-ykkC 2690476 RB2654_05847 COG4125 # RNA - Cobalamin 2688071 RB2654_11383 cbtB 2688072 RB2654_11388 cbtA # RNA - serC 2690382 RB2654_11979 serC 2690383 RB2654_11984 serA # RNA - SAM_alpha 2686219 RB2654_19698 metY # RNA - TPP 2690190 RB2654_21928 ykoF 2690191 RB2654_21933 thiX2 2690192 RB2654_21938 thiZ2 2690193 RB2654_21943 thiY2 2688543 RB2654_14515 thiB 2688542 RB2654_14510 thiP 2688541 RB2654_14505 thiQ # RNA - ykkC-yxkD 2688865 RB2654_08657 uctB 2688864 RB2654_08652 uctP 2688863 RB2654_08647 uctA 2688862 RB2654_08642 speB 2688861 RB2654_08637 null 2688860 RB2654_08632 null # RNA - Glycine 2685994 RB2654_18583 gcvT 2685993 RB2654_18578 gcvH 2685992 RB2654_18573 RB2654_18573 2685991 RB2654_18568 null 2685990 RB2654_18563 gcvP # RNA - SAM-SAH 2690582 RB2654_18193 metK # TF - AglR: RB2654_03744 2690640 RB2654_03744 aglR 2690641 RB2654_03749 RSP_2874 2690642 RB2654_03754 glk 2690639 RB2654_03739 aglE 2690638 RB2654_03734 aglF 2690637 RB2654_03729 aglG 2690636 RB2654_03724 aglA 2690635 RB2654_03719 aglK # TF - HrcA: RB2654_13559 2688757 RB2654_08122 groS 2688756 RB2654_08117 groL # TF - MntR: RB2654_22338 2689361 RB2654_22338 mntR 2687101 RB2654_12814 COG2132 2687100 RB2654_12809 COG0428 # TF - CueR: RB2654_14855 2688602 RB2654_14810 copZ 2689341 RB2654_22238 copZ # TF - CadR-PbrR: RB2654_22398, RB2654_10324 2689358 RB2654_22323 PF03734 2689373 RB2654_22398 cadR 2689374 RB2654_22403 czcD 2687858 RB2654_10329 czcD2 2689375 RB2654_22408 PF01841 2689376 RB2654_22413 czcD2 2689377 RB2654_22418 PF11964 2689359 RB2654_22328 cadA # TF - CceR (GapR): RB2654_15484 2690005 RB2654_05195 fba 2687541 RB2654_03494 edd 2687540 RB2654_03489 eda 2689598 RB2654_01815 zwf 2689599 RB2654_01820 pgl 2689600 RB2654_01825 pgi 2686076 RB2654_18993 tal 2686824 RB2654_17316 mdh 2686695 RB2654_16676 pykA 2687323 RB2654_02429 gapA 2686541 RB2654_15911 pckA 2688857 RB2654_08617 scrK 2688858 RB2654_08622 scrK 2687324 RB2654_02434 yedI 2687456 RB2654_03084 eno 2687321 RB2654_02419 gapB # TF - Chvl: RB2654_15916 2686542 RB2654_15916 chvI 2686543 RB2654_15921 chvG 2686544 RB2654_15926 Jann_0538 2686545 RB2654_15931 manX 2686546 RB2654_15936 null 2686547 RB2654_15941 phbH 2686548 RB2654_15946 null # TF - MetR: RB2654_08000 2686324 RB2654_20213 metH2 2686325 RB2654_20218 metH 2690470 RB2654_08000 metR 2690471 RB2654_08005 metF # TF - FnrN: RB2654_10044 2687798 RB2654_10034 uspA 2687800 RB2654_10044 fnrN 2687520 RB2654_03389 hemA 2687792 RB2654_10004 ccoG 2687791 RB2654_09999 ccoH 2687790 RB2654_09994 ccoI 2687789 RB2654_09989 ccoS 2687797 RB2654_10029 ccoN 2687796 RB2654_10024 ccoO 2687795 RB2654_10019 ccoQ 2687794 RB2654_10014 ccoP 2687801 RB2654_10049 hemN 2688778 RB2654_08222 ctaD 2688204 RB2654_06514 ctaC 2688203 RB2654_06509 ctaB 2688202 RB2654_06504 ctaX 2688201 RB2654_06499 ctaG 2688200 RB2654_06494 ctaE