Regulon of LexA in Rhodobacterales bacterium HTCC2654

Properties
Regulator type:	Transcription factor
TF locus tag:	RB2654_04726
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	11
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -28 Score: 0.3 Sequence: GAACAAAACGTGAAT Locus tag: RB2654_12554 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RB2654_12554	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -111 Score: 1.3 Sequence: GAACATACCCTGAAC Locus tag: RB2654_21543 Name: uvrD Funciton: ATP-dependent DNA helicase II
	RB2654_21543	uvrD	ATP-dependent DNA helicase II
Position: -37 Score: 1.7 Sequence: GAACATTAAGTGAAC Locus tag: RB2654_16956 Name: imuB Funciton: DNA polymerase-like protein PA0670
	RB2654_16956	imuB	DNA polymerase-like protein PA0670
Position: -83 Score: -0.4 Sequence: ACACGAAACGAGAAC Locus tag: RB2654_04726 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	RB2654_04726	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -56 Score: 1 Sequence: GAACAAGAGGCGAAC Locus tag: RB2654_03904 Name: recA Funciton: Recombinase A
	RB2654_03904	recA	Recombinase A
Position: -62 Score: 5.2 Sequence: GTTCGCGTTTCGTGC Locus tag: RB2654_05712 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: RB2654_05707 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: RB2654_05702 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	RB2654_05712	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	RB2654_05707	ruvA	Holliday junction DNA helicase RuvA
	RB2654_05702	ruvB	Holliday junction DNA helicase RuvB
Position: -81 Score: 4.9 Sequence: GTTCACACTTCGTTC Locus tag: RB2654_04776 Name: uvrA Funciton: Excinuclease ABC subunit A
	RB2654_04776	uvrA	Excinuclease ABC subunit A
Position: -20 Score: 4.5 Sequence: GTTCTACTAATGTTC Locus tag: RB2654_02045 Name: PF04055 Funciton: Radical SAM domain protein
	RB2654_02045	PF04055	Radical SAM domain protein
Position: -26 Score: 4.8 Sequence: GTTCACGAATTGTTC Locus tag: RB2654_05485 Name: PF06319 Funciton: Transcription elongation factor
	RB2654_05485	PF06319	Transcription elongation factor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Rhodobacterales bacterium HTCC2654

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --