Profile of regulator LexA in Rhodobacterales
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhodobacterales |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Rhodobacterales
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Rhodobacter sphaeroides 2.4.1 | |||||
| RSP_0452 | recA | -64 | 1.1 | GAACATAGGGCGAAC | |
| RSP_2092 | uvrD | -56 | 0.7 | GAACGATTGCGGAAC | |
| RSP_1458 | imuB | -20 | 0.6 | GAACGAAACAGGAAC | |
| RSP_0556 | ruvC | -48 | 5 | GTTCCCGCTTCGTGC | |
| RSP_2966 | uvrA | -92 | 4.8 | GTTCATACTATGTTC | |
| RSP_2123 | PF04055 | -27 | 4.9 | GTTCCCTTTGCGTTC | |
| RSP_0452 | recA | -92 | 5 | GTTCGCCTTATGATC | |
| RSP_0751 | PF06319 | 10 | 4.5 | GTTCCCTGTCCGTTC | |
| Paracoccus denitrificans PD1222 | |||||
| Pden_4289 | imuA | -56 | 0.7 | GAACAAATCAGGAAC | |
| Pden_2142 | lexA | -47 | 1.4 | GAACAATCAACGAAC | |
| Pden_0597 | recA | -77 | 1 | GAACAACCCGTGAAC | |
| Pden_0696 | ruvC | -44 | 5.1 | GTTCGCCTTTCGTGC | |
| Pden_2252 | uvrA | -81 | 4.7 | GTTCCTGTGATGTTC | |
| Pden_3951 | PF04055 | -27 | 4.8 | GTTCTCTAAATGTTC | |
| Pden_1550 | PF06319 | -26 | 4.8 | GTTTCCGTTTCGTTC | |
| Jannaschia sp. CCS1 | |||||
| Jann_2777 | uvrD | -56 | 1.5 | GAACAATCTGCGAAC | |
| Jann_1560 | imuA | 10 | 0.8 | GAACAAATAGGGAAC | |
| Jann_1874 | lexA | -77 | 1.3 | GAACATACCCTGAAC | |
| Jann_1986 | recA | -98 | 0.6 | GAACAAGACAAGAAC | |
| Jann_0964 | ruvC | 2 | 5.2 | GTTCGCGTTTCGTGC | |
| Jann_1723 | uvrA | -82 | 4.5 | GTTCCTGAAACGTTC | |
| Jann_2549 | PF04055 | -9 | 4.7 | GTTCTTCAAATGTTC | |
| Jann_1986 | recA | -127 | 4.9 | GTTCTTGTTTTGTTT | |
| Jann_3406 | PF06319 | -26 | 5 | GTTCACCTATTGTTC | |
| Rhodobacterales bacterium HTCC2654 | |||||
| RB2654_12554 | dnaE2 | -28 | 0.3 | GAACAAAACGTGAAT | |
| RB2654_21543 | uvrD | -111 | 1.3 | GAACATACCCTGAAC | |
| RB2654_16956 | imuB | -37 | 1.7 | GAACATTAAGTGAAC | |
| RB2654_04726 | lexA | -83 | -0.4 | ACACGAAACGAGAAC | |
| RB2654_03904 | recA | -56 | 1 | GAACAAGAGGCGAAC | |
| RB2654_05712 | ruvC | -62 | 5.2 | GTTCGCGTTTCGTGC | |
| RB2654_04776 | uvrA | -81 | 4.9 | GTTCACACTTCGTTC | |
| RB2654_02045 | PF04055 | -20 | 4.5 | GTTCTACTAATGTTC | |
| RB2654_05485 | PF06319 | -26 | 4.8 | GTTCACGAATTGTTC | |
| Oceanicola granulosus HTCC2516 | |||||
| OG2516_00125 | uvrD | -57 | -0.1 | GAACAGAGCGGGAAC | |
| OG2516_00284 | imuA | -40 | 0.8 | GAACAAATGAAGAAC | |
| OG2516_03218 | lexA | -70 | -0.5 | ACACAAAACGGGAAC | |
| OG2516_04603 | recA | -63 | 1 | GAACAAGAGGCGAAC | |
| OG2516_07702 | ruvC | -50 | 4.9 | GTTCGCTGTTTGTGC | |
| OG2516_01124 | uvrA | -80 | 5.2 | GTTCGCGCTATGTTC | |
| OG2516_06172 | PF04055 | -30 | 5.4 | GTTCTTCTTTTGTTC | |
| OG2516_04603 | recA | -91 | 5 | GTTCTCTTTTTGGTC | |
| OG2516_05778 | PF06319 | -27 | 4.9 | GTTTCCCTTTTGTTC | |
| Loktanella vestfoldensis SKA53 | |||||
| SKA53_07341 | uvrD | -55 | 0.8 | GAACGGAAGTAGAAC | |
| SKA53_09714 | imuA | -59 | 1 | GAACAAAGCATGAAC | |
| SKA53_02996 | lexA | -32 | 0 | GAACATAAGCAAAAC | |
| SKA53_02996 | lexA | -54 | -0.4 | ACACAAAAGGGGAAC | |
| SKA53_03339 | recA | -64 | 1.3 | GAACATAAGGCGAAC | |
| SKA53_08611 | ruvC | -49 | 5.3 | GTTCGCCTTTTGTGC | |
| SKA53_02831 | uvrA | -78 | 4.1 | GTTCTATGAATGTTC | |
| SKA53_03339 | recA | -91 | 4.9 | GTTCATGTTTTGATC | |
| SKA53_02001 | PF06319 | -26 | 5 | GTTCACCTATTGTTC | |
| Oceanicola batsensis HTCC2597 | |||||
| OB2597_14496 | dnaE2 | -48 | 0.3 | GAACAAAACGTGAAT | |
| OB2597_10771 | imuB | -27 | 1.4 | GAACGTAAAAGGAAC | |
| OB2597_01402 | lexA | -63 | 0.4 | ACACAAAACATGAAC | |
| OB2597_01672 | recA | -68 | 1 | GAACAAGAGGCGAAC | |
| OB2597_15620 | ruvC | -61 | 4.7 | GTTCACTATTCGTGC | |
| OB2597_01212 | uvrA | -80 | 4.8 | GTTCGCGCAATGTTC | |
| OB2597_03227 | PF04055 | -27 | 5 | GTTCTCTTAATGTTC | |
| OB2597_01672 | recA | -91 | 4.9 | GTTCTTCTTTTGGTC | |
| OB2597_02052 | PF06319 | -26 | 4.6 | GTTCACTAAATGTTC | |
| Roseovarius nubinhibens ISM | |||||
| ISM_13365 | uvrD | -56 | 0.4 | GAACAATCGCGGAAC | |
| ISM_14765 | lexA | -58 | -0.5 | ACACAAAACGAGAAC | |
| ISM_14955 | recA | -90 | 0.7 | GAACAGCACGCGAAC | |
| ISM_03450 | ruvC | -60 | 5.2 | GTTCTTGTTTCGTGC | |
| ISM_10865 | uvrA | -77 | 4.9 | GTTCACAGTTTGTTC | |
| ISM_13455 | PF04055 | -27 | 5.1 | GTTCGCGGTTTGTTC | |
| ISM_14955 | recA | -118 | 5.3 | GTTCTCATTTTGTGC | |
| ISM_00090 | PF06319 | -26 | 5.1 | GTTCCCGCTTCGTTC | |
| Roseovarius sp. 217 | |||||
| ROS217_05784 | dnaE2 | -46 | 0.6 | GAACAAAACTGGAAC | |
| ROS217_21917 | uvrD | -56 | 0.8 | GAACAATCCCCGAAC | |
| ROS217_11166 | imuB | -24 | 0.8 | GAACAAATAGAGAAC | |
| ROS217_21392 | lexA | -58 | -0.5 | ACACAAAACGGGAAC | |
| ROS217_20887 | recA | -66 | 1 | GAACAAGAGGCGAAC | |
| ROS217_22507 | ruvC | -51 | 5.2 | GTTCCCGTTTCGTGC | |
| ROS217_19127 | uvrA | -82 | 4.9 | GTTCGCGCTCTGTTC | |
| ROS217_19572 | PF04055 | 6 | 5.1 | GTTCTCTATATGTTC | |
| ROS217_20887 | recA | -94 | 4.9 | GTTCTCTCTTTGTCC | |
| ROS217_03665 | PF06319 | -26 | 5 | GTTCGTGGTTTGTTC | |
| Sulfitobacter sp. EE-36 | |||||
| EE36_13253 | umuD | -154 | 1.4 | GAACACATAGAGAAC | |
| EE36_17037 | uvrD | -55 | 2.1 | GAACATTTTGCGAAC | |
| EE36_16202 | lexA | -56 | -0.3 | ACACAAAACAGGAAC | |
| EE36_14243 | recA | -82 | 1.1 | GAACATAGAAAGAAC | |
| EE36_09705 | ruvC | -56 | 5.2 | GTTCGCGTTTCGTGC | |
| EE36_13533 | uvrA | -78 | 5.1 | GTTCCCCTTGTGTTC | |
| EE36_15677 | PF04055 | -27 | 5 | GTTCCTAATTTGTTC | |
| EE36_14243 | recA | -104 | 5.1 | GTTCTCATTTTGATC | |
| EE36_02883 | PF06319 | -26 | 4.7 | GTTCATGAATTGTTC | |
| EE36_16347 | radA | -29 | 4.7 | GTTTCCCCTTTGTTC | |
| Silicibacter TM1040 | |||||
| TM1040_2024 | uvrD | -57 | 0.7 | GAACGGAGCGTGAAC | |
| TM1040_1135 | lexA | -58 | -0.5 | ACACAAAACGGGAAC | |
| TM1040_1230 | recA | -72 | 0.5 | GAACAAGAGGAGAAC | |
| TM1040_1135 | lexA | -83 | 4.6 | GTTCCCCTTATGACC | |
| TM1040_2373 | ruvC | 4 | 5.4 | GTTCGCGTTTTGTGC | |
| TM1040_1098 | uvrA | -77 | 4.9 | GTTCCCCCTCTGTTC | |
| TM1040_1469 | PF04055 | -39 | 5.2 | GTTCTTTATTTGTTC | |
| TM1040_1230 | recA | -94 | 4.8 | GTTCTTGTTTTGACC | |
| TM1040_2122 | PF06319 | -170 | 4.7 | GTTCACTAATTGTTC | |
| Silicibacter pomeroyi DSS-3 | |||||
| SPO2034 | recA | -87 | 1.2 | GAACAAGAGGTGAAC | |
| SPO1174 | uvrD | -113 | 1.1 | GAACAAGCCGTGAAC | |
| SPO2154 | lexA | -59 | -0.3 | ACACAAAACAAGAAC | |
| SPO3117 | ruvC | -60 | 5.1 | GTTCCCCTTTCGTGC | |
| SPO2218 | uvrA | -81 | 5.2 | GTTCTCTTTACGTTC | |
| SPO2034 | recA | -109 | 5.1 | GTTCTCTTTTTGATC | |
| SPO1766 | PF06319 | -20 | 5 | GTTCACCTATTGTTC | |
| Roseobacter sp. MED193 | |||||
| MED193_12418 | umuD | -30 | 0.2 | GAACAAAGGCAGAAC | |
| MED193_07538 | uvrD | -57 | 1.3 | GAACAGAATGCGAAC | |
| MED193_03687 | lexA | -47 | 1.5 | GAACATGAATAGAAC | |
| MED193_03687 | lexA | -58 | -0.5 | ACACAAAACGGGAAC | |
| MED193_09210 | ruvC | -64 | 5.3 | GTTCGCCTTTTGTGC | |
| MED193_03447 | uvrA | -117 | 4.8 | GTTCTTCTAACGTTC | |
| MED193_22781 | PF04055 | -39 | 5.2 | GTTCTTCATTTGTTC | |
| MED193_04366 | recA | -93 | 4.8 | GTTCTCCTTTTGACC | |
| MED193_08438 | PF06319 | -26 | 5.2 | GTTCTCTTATTGTTC | |
| MED193_12443 | umuD | -44 | 5.1 | GTTCACTTTATGTTC | |
| Hyphomonas neptunium ATCC 15444 | |||||
| HNE_2938 | uvrD | -138 | -0.9 | GAAAAAAGCGCAAAC | |
| HNE_2464 | imuA | -17 | 1.2 | GAACAAAATAAGAAC | |
| HNE_2765 | uvrA | -95 | 5.3 | GTTCACATTTTGTTC | |
| HNE_1903 | PF04055 | -100 | 5.3 | GTTCTTGCTTTGTTC | |
| HNE_2742 | recA | -128 | 4.6 | GTTTCTGCTTTGTTC | |
| HNE_0511 | rmuC | -41 | 4.6 | GTTCCGATTATGTTC | |
| HNE_0720 | radA | -294 | 4.3 | GTCCATTTTTCGTTC | |
| Oceanicaulis alexandrii HTCC2633 | |||||
| OA2633_04776 | recA | -68 | 1.5 | GAACAAAATAAGTAC | |
| OA2633_07399 | ruvC | -38 | 4.9 | GGTCGCGTTTTGTTC | |
| OA2633_04146 | uvrA | -187 | 4.7 | GTTCACATTCCGTTC | |
| OA2633_14191 | PF04055 | -9 | 5.1 | GTTCTTGATATGTTC | |
| OA2633_04776 | recA | -86 | 4.8 | GTTCCTGTTGCGTTC | |
| OA2633_12765 | rmuC | -37 | 4.7 | GGTCCCGTTTCGTTC | |
| OA2633_02671 | lexA | -27 | 4.7 | GTTTCTATTTTGTTC | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |