Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CceR (GapR) in Rhodobacterales bacterium HTCC2654

Properties
Regulator type: Transcription factor
TF locus tag: RB2654_15484
Regulator family: LacI
Regulation mode:
Biological process: Central carbohydrate metabolism
Effector: 6-phosphogluconate
Regulog: CceR (GapR) - Rhodobacterales
Statistics of regulated genes:
- Genes 16
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 177 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -81
Score: 4.4
Sequence: ATGCGTTAGCGCGACCAGAA
Locus tag: RB2654_05195
Name: fba
Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
RB2654_05195
fba
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Position: -65
Score: 5.2
Sequence: GGTTGTTAGCGCTATCACGA
Locus tag: RB2654_03494
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: RB2654_03489
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
RB2654_03494
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
RB2654_03489
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -60
Score: 4.9
Sequence: TTGGGTTAGCGCTAACAATC
Locus tag: RB2654_01815
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: RB2654_01820
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: RB2654_01825
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
RB2654_01815
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
RB2654_01820
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
RB2654_01825
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -47
Score: 4.2
Sequence: GTATGACACCGCTAACATTT
Locus tag: RB2654_18993
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
RB2654_18993
tal
Transaldolase (EC 2.2.1.2)
Position: -121
Score: 4.4
Sequence: CACCTTTAGCGGTATCAACG
Locus tag: RB2654_17316
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
RB2654_17316
mdh
Malate dehydrogenase (EC 1.1.1.37)
Position: -28
Score: 5.3
Sequence: GACTGTTACCGCAAACAGAC
Locus tag: RB2654_16676
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
RB2654_16676
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -176
Score: 4.7
Sequence: CCGCGTTTGCGTTAACGGTT
Position: -164
Score: 4.3
Sequence: TAACGGTTCCGCTAACGCCC
Position: -134
Score: 5.1
Sequence: ATATGTTTTCGCTAACACGC
Locus tag: RB2654_02429
Name: gapA
Funciton: Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
RB2654_02429
gapA
Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -230
Score: 5
Sequence: TGGTGGTTGCGCAAACAGCC
Position: -209
Score: 4.6
Sequence: CATTGCTTGCGCTAACGCGA
Locus tag: RB2654_15911
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
RB2654_15911
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -68
Score: 4.1
Sequence: GGGTGATTGCGCAATCCGCG
Position: -36
Score: 5.1
Sequence: GACTGATACCGCTAACAACC
Locus tag: RB2654_08617
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
Locus tag: RB2654_08622
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
RB2654_08617
scrK
Fructokinase (EC 2.7.1.4)
RB2654_08622
scrK
Fructokinase (EC 2.7.1.4)
Position: -168
Score: 5.1
Sequence: GCGTGTTAGCGAAAACATAT
Position: -138
Score: 4.3
Sequence: GGGCGTTAGCGGAACCGTTA
Position: -126
Score: 4.7
Sequence: AACCGTTAACGCAAACGCGG
Locus tag: RB2654_02434
Name: yedI
Funciton: conserved inner membrane protein
RB2654_02434
yedI
conserved inner membrane protein
Position: -85
Score: 4.4
Sequence: CACCGTTGGCGCAACCGCCC
Locus tag: RB2654_03084
Name: eno
Funciton: Enolase (EC 4.2.1.11)
RB2654_03084
eno
Enolase (EC 4.2.1.11)
Position: -91
Score: 5.4
Sequence: TGATGTTAGCGGTAACGGCG
Locus tag: RB2654_02419
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
RB2654_02419
gapB
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
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