Profile of regulator CceR (GapR) in Rhodobacterales
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 6-phosphogluconate |
| Regulog: | CceR (GapR) - Rhodobacterales |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - LacI
- By effector - 6-phosphogluconate
- By pathway - Central carbohydrate metabolism
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Jannaschia sp. CCS1 | |||||
| Jann_1953 | edd | -55 | 5.8 | ACATGTTAGCGCTAACATGA | |
| Jann_1969 | zwf | -37 | 5.8 | CGCTGTTAGCGCTAACGTGA | |
| Jann_1695 | gapB | -63 | 5.4 | CCCTGTTACCGCTAACACAC | |
| Jann_0447 | pykA | -80 | 5.3 | GACTGATAGCGCAAACATCG | |
| Jann_0535 | pckA | -138 | 4.9 | GTATGGTTGCGCTAACTGTG | |
| Jann_1698 | gapA | -128 | 4.9 | CCGTGTTAGCGCCACCACCC | |
| Jann_1698 | gapA | -109 | 4.6 | CGATGTTTGCGCCACCGTTT | |
| Jann_1698 | gapA | -97 | 5.2 | CACCGTTTCCGCTAACATGC | |
| Jann_0818 | mdh | -101 | 4.1 | GGGCGTTGGGGCTATCGGCC | |
| Jann_1032 | tal | -71 | 5.7 | TTCCGTTAGCGCTAACATGC | |
| Jann_2674 | scrK | -40 | 4.8 | AAAGGTTACCGCTAACACGT | |
| Jann_1699 | yedI | -148 | 4.9 | GGGTGGTGGCGCTAACACGG | |
| Jann_1699 | yedI | -167 | 4.6 | AAACGGTGGCGCAAACATCG | |
| Jann_1699 | yedI | -179 | 5.2 | GCATGTTAGCGGAAACGGTG | |
| Jann_1797 | eno | -84 | 5.4 | GCCTGTTACCGCTAACGGAA | |
| Jann_1693 | fba | -80 | 4.8 | GCCTGATAGCGCAACCATGA | |
| Loktanella vestfoldensis SKA53 | |||||
| SKA53_03186 | zwf | -42 | 5.3 | GGGCGTTAGCGCTAACGAAA | |
| SKA53_10229 | pykA | -39 | 5.4 | TGCTGTTACCGCTAACGGGC | |
| SKA53_05488 | edd | -58 | 5.6 | CCTTGTTAGCGCTAACACAA | |
| SKA53_13138 | pckA | -125 | 5.2 | ATTTGGTTGCGCTAACATGC | |
| SKA53_13138 | pckA | -105 | 4.8 | ATTTGGTTGCGCTAACGTTT | |
| SKA53_02881 | gapA | -135 | 5.1 | GAATGTTGGCGCAAACATTT | |
| SKA53_02881 | gapA | -122 | 4.7 | AACATTTAGCGGTAACAGCA | |
| SKA53_02881 | gapA | -93 | 5 | GTCTGTTACCGTTAACACCC | |
| SKA53_05615 | fba | -104 | 5.3 | CGCCGTTTGCGATAACATCC | |
| SKA53_05615 | fba | -83 | 5.1 | GTCCGTTCGCGCTAACATAT | |
| SKA53_01436 | scrK | -40 | 5.4 | ATTTGTTATCGCTAACAGCC | |
| SKA53_02871 | gapB | -40 | 5.6 | CAATGTTAGCGCCAACATTC | |
| SKA53_03091 | eno | -38 | 5.1 | CACTGATACCGCTAACATCG | |
| Oceanicola batsensis HTCC2597 | |||||
| OB2597_02942 | zwf | -47 | 4.2 | CTATGTTAGCGCCCAAACTC | |
| OB2597_02267 | edd | -54 | 5.2 | CATTGTTACCGCTAACAAAG | |
| OB2597_10686 | pykA | -52 | 4 | GATTGATAGCGTTCACATGA | |
| OB2597_10169 | pckA | -168 | 4.5 | GGGTGATTGCGCTAAAGTTT | |
| OB2597_10169 | pckA | -148 | 4.7 | ACTTGGTGGCGCTAACTGCG | |
| OB2597_01292 | gapA | -141 | 4.9 | GCCTGTTAGCGCCAACCCTC | |
| OB2597_01292 | gapA | -119 | 4.9 | ACGGGTTAGCGCCAACAGGC | |
| OB2597_01292 | gapA | -100 | 4.4 | CCGGTTTATCGCTAACATAC | |
| OB2597_09589 | mdh | -60 | 3.7 | CGCTGATCCCGCAAAATGCC | |
| OB2597_15590 | tal | -133 | 4.8 | TTTCGTTAGCGCTAGCAGAA | |
| OB2597_02982 | eno | -97 | 5.3 | ATCTGTTTGCGCAAACGCCC | |
| OB2597_01282 | gapB | -49 | 5.2 | CTATGTTAGCGTTAACGGAC | |
| OB2597_04490 | fba | -100 | 5.2 | GGGCGTTAGCGCCAACGGGC | |
| Oceanicola granulosus HTCC2516 | |||||
| OG2516_00150 | edd | -62 | 5.5 | GGTTGTTAGCGGTAACGGCC | |
| OG2516_09243 | pykA | -74 | 4.3 | TTGCGTTAGCGTTATCGACC | |
| OG2516_08708 | pckA | -124 | 4.7 | CGCGGGTTGCGCTAACATCA | |
| OG2516_08708 | pckA | -103 | 5 | CCTTGGTTGCGCTAACTGCG | |
| OG2516_03238 | fba | -82 | 5 | CCCCGGTGGCGCTAACAGGT | |
| OG2516_03740 | eno | -36 | 5.1 | GTCCGATAGCGCAAACATCT | |
| Paracoccus denitrificans PD1222 | |||||
| Pden_1952 | zwf | -65 | 4.1 | GCCTGAAACCGCTATCATCC | |
| Pden_1245 | eda | -85 | 5 | CTCAGTTAACGCTAACACAC | |
| Pden_1955 | edd | -48 | 5.4 | CAATGTTACCGCTAACAGGA | |
| Pden_2276 | pykA | -32 | 5.2 | CGACGATAGCGCAAACATGC | |
| Pden_2852 | pckA | -132 | 4.6 | AAATGATTGCGCTAACCGTC | |
| Pden_2852 | pckA | -113 | 4.5 | CTCTGATTGCGCTAACCCTG | |
| Pden_1978 | cceR | -39 | 4.1 | AAAAGATAACGGTAACATGA | |
| Pden_1920 | fba | -74 | 4.6 | TTCCGTTAGCGCAATCGCGA | |
| Pden_2946 | scrK | -77 | 4.9 | GGCAGTTACCGCTATCAGGA | |
| Pden_4465 | gapB | -124 | 4 | CAATTGCACCGCTAACATCG | |
| Pden_3815 | atpH | -153 | 4.7 | AGGTGTTTGCGCAATCGGTT | |
| Rhodobacter sphaeroides 2.4.1 | |||||
| RSP_0974 | sdhC | -189 | 5.1 | GCATGATTGCGCAAACATGT | |
| RSP_2734 | zwf | -38 | 6 | GGCCGTTAGCGCTAACAGGC | |
| RSP_1680 | pckA | -188 | 3.9 | CGGAGGTTGCGCCAACCTGT | |
| RSP_1680 | pckA | -168 | 5.2 | CGCTGGTTGCGCTAACGTCT | |
| RSP_0968 | mdh | -70 | 5 | TGCCTTTAGCGCAAACATCT | |
| RSP_1663 | cceR | -98 | 5.5 | GGCCGTTATCGCTAACATGG | |
| RSP_4045 | fba | -79 | 4.9 | CCAAGTTAGCGCGAACAACA | |
| RSP_2645 | eda | -2160 | 5.5 | GCTAGTTAGCGCTAACAAAC | |
| RSP_2296 | atpH | -288 | 4.8 | CGATGTTAGCGGCACCATCG | |
| Rhodobacterales bacterium HTCC2654 | |||||
| RB2654_01815 | zwf | -60 | 4.9 | TTGGGTTAGCGCTAACAATC | |
| RB2654_03494 | edd | -65 | 5.2 | GGTTGTTAGCGCTATCACGA | |
| RB2654_16676 | pykA | -28 | 5.3 | GACTGTTACCGCAAACAGAC | |
| RB2654_15911 | pckA | -230 | 5 | TGGTGGTTGCGCAAACAGCC | |
| RB2654_15911 | pckA | -209 | 4.6 | CATTGCTTGCGCTAACGCGA | |
| RB2654_02429 | gapA | -176 | 4.7 | CCGCGTTTGCGTTAACGGTT | |
| RB2654_02429 | gapA | -164 | 4.3 | TAACGGTTCCGCTAACGCCC | |
| RB2654_02429 | gapA | -134 | 5.1 | ATATGTTTTCGCTAACACGC | |
| RB2654_17316 | mdh | -121 | 4.4 | CACCTTTAGCGGTATCAACG | |
| RB2654_18993 | tal | -47 | 4.2 | GTATGACACCGCTAACATTT | |
| RB2654_08617 | scrK | -36 | 5.1 | GACTGATACCGCTAACAACC | |
| RB2654_05195 | fba | -81 | 4.4 | ATGCGTTAGCGCGACCAGAA | |
| RB2654_03084 | eno | -85 | 4.4 | CACCGTTGGCGCAACCGCCC | |
| RB2654_02419 | gapB | -91 | 5.4 | TGATGTTAGCGGTAACGGCG | |
| RB2654_08617 | scrK | -68 | 4.1 | GGGTGATTGCGCAATCCGCG | |
| RB2654_02434 | yedI | -138 | 4.3 | GGGCGTTAGCGGAACCGTTA | |
| RB2654_02434 | yedI | -126 | 4.7 | AACCGTTAACGCAAACGCGG | |
| RB2654_02434 | yedI | -168 | 5.1 | GCGTGTTAGCGAAAACATAT | |
| Roseobacter sp. MED193 | |||||
| MED193_12017 | pykA | -78 | 5.2 | TGCTGTTTGCGGTAACATTT | |
| MED193_16479 | pckA | -183 | 4.3 | CAATGGTTGCGCTAAACTCC | |
| MED193_16479 | pckA | -162 | 4.8 | CCTTGGTGGCGCTAACTGCG | |
| MED193_16479 | pckA | -95 | 3.7 | AACCGGTGGCGATACCGGCA | |
| MED193_03557 | gapA | -132 | 4.5 | AAGCGTTAGCGCCACCGTGT | |
| MED193_03557 | gapA | -99 | 3.9 | TCCCGTTAACGCCACCGGTA | |
| MED193_03557 | gapA | -77 | 4.1 | AACCGTTAACGCCACCGGTC | |
| MED193_03557 | gapA | -58 | 4.6 | CTAGTTTTGCGCTAACATAC | |
| MED193_10071 | gapB | -110 | 4 | CTCCGTTATCGATACCGATA | |
| MED193_10071 | gapB | -88 | 4.9 | TAATGTTAGCGATAACGAAT | |
| MED193_07548 | pycA | -104 | 4.2 | GAATGAGAGCGCAATCATGC | |
| MED193_09260 | tal | -48 | 4 | AAAGGCTAGCGCAATCAAGG | |
| MED193_03562 | yedI | -156 | 4.6 | GTATGTTAGCGCAAAACTAG | |
| MED193_03562 | yedI | -137 | 4.1 | GACCGGTGGCGTTAACGGTT | |
| MED193_03562 | yedI | -82 | 4.5 | ACACGGTGGCGCTAACGCTT | |
| MED193_20764 | fba | -100 | 4.7 | GCCCGTTAGCGCAAGCGCTT | |
| MED193_22551 | eno | -136 | 4.5 | TACCGGTGGCGCAAACAGGT | |
| MED193_22551 | eno | -116 | 4 | GAATGGTAACGTTAACTGTG | |
| MED193_22551 | eno | -87 | 5.1 | TGCCGTTAGCGGTAACGAAG | |
| MED193_10066 | cceR2 | -119 | 4.9 | ATTCGTTATCGCTAACATTA | |
| MED193_17414 | pgi | -77 | 5 | TACCGTTATCGCTAACAGTA | |
| Roseovarius nubinhibens ISM | |||||
| ISM_02615 | pykA | -82 | 5.1 | TGATGTTAGCGATAACGGTA | |
| ISM_13535 | pckA | -174 | 5.3 | CGCTGGTTGCGCTAACGTCC | |
| ISM_13535 | pckA | -154 | 4.6 | AATTGGTTGCGCTAACTCAG | |
| ISM_10930 | gapA | -105 | 4.6 | GAAATTTATCGCTAACAAGG | |
| ISM_03480 | tal | -123 | 3.6 | GGCGGTTTGCGGCAAATTAT | |
| ISM_08560 | cceR | -48 | 4.6 | CACCGTTCGCGATAACATTT | |
| ISM_16480 | eno | -85 | 5.2 | TCGTGTTAGCGATAACATAT | |
| ISM_16480 | eno | -126 | 4.1 | AACCGTTACCGGCATCATCG | |
| ISM_04665 | fba | -80 | 4.6 | AGGCGTTAGCGCCACCAAGA | |
| ISM_11730 | atpH | -302 | 4.6 | TTACGATAGCGGTAACGCCG | |
| Roseovarius sp. 217 | |||||
| ROS217_12046 | pykA | -51 | 5.4 | CGATGTTAGCGTTAACATTG | |
| ROS217_04095 | pckA | -197 | 4.8 | GCGCGTTGTCGCTAACATAC | |
| ROS217_04095 | pckA | -177 | 5.1 | GTCTGGTTGCGCTAACTTGC | |
| ROS217_04095 | pckA | -157 | 4.9 | GCTTGGTTGCGCTAACTGCA | |
| ROS217_15745 | pckA | -77 | 4.8 | AAGTGATTGCGCTAACTTGG | |
| ROS217_23117 | gapA | -150 | 4.7 | TTGCGTTAGCGCAATCACCG | |
| ROS217_23117 | gapA | -109 | 4.9 | CTAGGTTAACGCTAACATCC | |
| ROS217_09370 | cceR | -46 | 4.6 | GGGCGTTCGCGGTAACAATG | |
| ROS217_17772 | fba | -85 | 4.7 | TTCTGTTAGCGCCACCACGA | |
| ROS217_23127 | gapB | -35 | 5.7 | AATTGTTAGCGCTAACATAT | |
| ROS217_14311 | atpH | -214 | 4.6 | CCATGATAGCGTTAACGCTT | |
| Silicibacter TM1040 | |||||
| TM1040_0378 | pgi | -98 | 5.5 | CATTGTTAGCGCTAACTTGG | |
| TM1040_2516 | pykA | -114 | 4.9 | AAATGTTTGCGTTAACGGTC | |
| TM1040_3042 | scrK | -93 | 4.7 | AAATGTTAGCGCTTTCAGGT | |
| TM1040_2442 | pckA | -198 | 4 | TTTTGGTGGCGCTAAAGGTT | |
| TM1040_2442 | pckA | -177 | 5.1 | GCTTGGTTGCGCTAACGACC | |
| TM1040_1111 | gapA | -150 | 4.8 | AACAGTTACCGCAAACGCCG | |
| TM1040_1111 | gapA | -126 | 4.3 | AGGTGTTAACGCCACCATCA | |
| TM1040_1111 | gapA | -107 | 4.5 | AAGGTTTTGCGCTAACAGTC | |
| TM1040_0417 | gapB | -85 | 4.7 | CTTCGTTAGCGATAACGATA | |
| TM1040_0417 | gapB | -60 | 4.5 | GAGTGATAGCGGTACCAGTG | |
| TM1040_2028 | pycA | -102 | 4.5 | GCAAGTGAGCGCAATCATGC | |
| TM1040_2379 | tal | -129 | 5.3 | CGCTGTTTACGCTAACATGC | |
| TM1040_0931 | eno | -214 | 4.1 | AAGGGTGAGCGCTATCATCT | |
| TM1040_0931 | eno | -89 | 5.1 | AGCCGTTAGCGGTAACGCTT | |
| TM1040_1976 | fba | -105 | 5 | GGGCGTTAGCGCAACCATTG | |
| TM1040_1112 | yedI | -124 | 4.8 | CGGCGTTTGCGGTAACTGTT | |
| TM1040_1112 | yedI | -148 | 4.3 | TGATGGTGGCGTTAACACCT | |
| TM1040_1112 | yedI | -167 | 4.5 | GACTGTTAGCGCAAAACCTT | |
| TM1040_0378 | pgi | -130 | 3.8 | GCAAGTTTGCGAAAATTTGG | |
| Silicibacter pomeroyi DSS-3 | |||||
| SPO3033 | zwf | -65 | 5.5 | ACATGTTAGCGGTAACATTG | |
| SPO2048 | zwf | -53 | 5.6 | AAATGTTTGCGCTAACAGTG | |
| SPO3600 | pykA | -43 | 5.2 | GGATGTTTGCGGTAACATAA | |
| SPOA0276 | scrK | -48 | 3.8 | GCCGGTTTGCGCTGAGATGC | |
| SPO0709 | pckA | -172 | 4 | TCTTGGTTGCGCTAAACTAT | |
| SPO0709 | pckA | -151 | 5 | CCTTGGTTGCGCTAACTGCG | |
| SPO2198 | gapA | -123 | 4.8 | AAGCGTTAGCGCAACCGGGG | |
| SPO2198 | gapA | -104 | 5.4 | GCAAGTTTGCGCTAACACCT | |
| SPO0701 | gapB | -59 | 5.5 | TTTTGTTAGCGCTAACAAAT | |
| SPO1171 | pycA | -104 | 4.4 | GGATGCGAGCGATAACATGC | |
| SPO0349 | mdh | -130 | 4.8 | CGCTTTTAGCGCAATCACCC | |
| SPO3684 | cceR | -49 | 4.6 | TGCCGTTCGCGCTAGCATCG | |
| SPO2474 | eno | -137 | 5.4 | CGCTGTTGGCGCAAACAGGG | |
| SPO2474 | eno | -117 | 4.9 | ATGTGTTAGCCCTAACTGCG | |
| SPO2474 | eno | -88 | 4.9 | GCGTGTTAGCGATAGCAGTC | |
| SPO1899 | fba | -83 | 4.3 | GTAGTTGAGCGCTAACATCC | |
| SPO2197 | yedI | -99 | 5.4 | AGGTGTTAGCGCAAACTTGC | |
| SPO2197 | yedI | -80 | 4.8 | CCCCGGTTGCGCTAACGCTT | |
| Sulfitobacter sp. EE-36 | |||||
| EE36_09240 | edd | -74 | 5.6 | ATAAGTTAGCGCTAACATAC | |
| EE36_08598 | pykA | -128 | 5 | AAGTGTTAACGCTAACACAT | |
| EE36_08598 | pykA | -112 | 5 | ACATGTTAACGCTAACTTAT | |
| EE36_04888 | pckA | -158 | 4.8 | GACAGTTTCCGCAAACAGTT | |
| EE36_04888 | pckA | -138 | 4.8 | ACATGGTGGCGCTAACTGCG | |
| EE36_13588 | gapA | -129 | 4.6 | GAGGGTTATCGCTAACACGA | |
| EE36_13588 | gapA | -110 | 4.5 | AATATTTATCGCTAACATAC | |
| EE36_13578 | gapB | -35 | 5.3 | CGATGTTAGCGCTATCAAAT | |
| EE36_13593 | yedI | -83 | 4.6 | TCGTGTTAGCGATAACCCTC | |
| EE36_13593 | yedI | -102 | 4.5 | GTATGTTAGCGATAAATATT | |
| EE36_15917 | eno | -148 | 4.7 | CTATGTTGGCGCAACCATCA | |
| EE36_15792 | zwf | -66 | 5.6 | GTATGTTTGCGCTAACATCA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |